Articles | Volume 8, issue 1
https://doi.org/10.5194/soil-8-437-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/soil-8-437-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Tolerance of soil bacterial community to tetracycline antibiotics induced by As, Cd, Zn, Cu, Ni, Cr, and Pb pollution
Vanesa Santás-Miguel
CORRESPONDING AUTHOR
Área de Edafoloxía e Química Agrícola, Facultade de Ciencias, Universidade de Vigo, As Lagoas 1, 32004 Ourense, Spain
Avelino Núñez-Delgado
Departamento de Edafoloxía e Química Agrícola, Escola Politécnica Superior de Enxeñaría, Universidade de Santiago de Compostela, Lugo, Spain
Esperanza Álvarez-Rodríguez
Departamento de Edafoloxía e Química Agrícola, Escola Politécnica Superior de Enxeñaría, Universidade de Santiago de Compostela, Lugo, Spain
Montserrat Díaz-Raviña
Departamento de Bioquímica del Suelo, Instituto de Investigaciones Agrobiológicas de Galicia (IIAG/CSIC), Santiago de Compostela, Spain
Manuel Arias-Estévez
Área de Edafoloxía e Química Agrícola, Facultade de Ciencias, Universidade de Vigo, As Lagoas 1, 32004 Ourense, Spain
David Fernández-Calviño
Área de Edafoloxía e Química Agrícola, Facultade de Ciencias, Universidade de Vigo, As Lagoas 1, 32004 Ourense, Spain
Related authors
No articles found.
Claudia Campillo-Cora, Daniel Arenas-Lago, Manuel Arias-Estévez, and David Fernández-Calviño
SOIL, 9, 561–571, https://doi.org/10.5194/soil-9-561-2023, https://doi.org/10.5194/soil-9-561-2023, 2023
Short summary
Short summary
Cr pollution is a global concern. The use of methodologies specifically related to Cr toxicity is appropriate, such as the pollution-induced community tolerance (PICT) methodology. The development of PICT was determined in 10 soils after Cr addition in the laboratory. The Cr-soluble fraction and dissolved organic carbon were the main variables determining the development of PICT (R2 = 95.6 %).
M. Otero, L. Cutillas-Barreiro, J. C. Nóvoa-Muñoz, M. Arias-Estévez, M. J. Fernández-Sanjurjo, E. Álvarez-Rodríguez, and A. Núñez-Delgado
Solid Earth, 6, 373–382, https://doi.org/10.5194/se-6-373-2015, https://doi.org/10.5194/se-6-373-2015, 2015
Short summary
Short summary
The pyritic material studied here had the highest Cr(VI) retention, whereas the lowest corresponded to granitic material. The highest Cr retention was achieved at very acid pH. The amendment with 12 t ha-1 mussel shell did not cause marked changes in Cr(VI) retention. Regarding Cr(VI) fractionation, the soluble fraction was dominant in mussel shell and in the unamended and amended granitic material, whereas more stable fractions dominated in the pyritic material and in the forest soil.
N. Seco-Reigosa, L. Cutillas-Barreiro, J. C. Nóvoa-Muñoz, M. Arias-Estévez, E. Álvarez-Rodríguez, M. J. Fernández-Sanjurjo, and A. Núñez-Delgado
Solid Earth, 6, 337–346, https://doi.org/10.5194/se-6-337-2015, https://doi.org/10.5194/se-6-337-2015, 2015
Short summary
Short summary
The granitic material presented lower As(V) adsorption capacity than the mussel shell studied. Fine shell showed moderate As(V) retention (higher than coarse shell). The amendment of 12 and 24 t ha-1 fine shell on the granitic material increased As(V) retention. Most of the adsorbed As(V) did not desorb in a wide range of pH. The adsorbed As(V) was retained mainly on the soluble fraction, with weak bindings, also facilitating release and transfer to water, plants and the food chain.
M. J. Fernández-Sanjurjo, E. Alvarez-Rodríguez, A. Núñez-Delgado, M. L. Fernández-Marcos, and A. Romar-Gasalla
Solid Earth, 5, 1351–1360, https://doi.org/10.5194/se-5-1351-2014, https://doi.org/10.5194/se-5-1351-2014, 2014
Related subject area
Soil degradation
Gully rehabilitation in Southern Ethiopia – value and impacts for farmers
A millennium of arable land use – the long-term impact of tillage and water erosion on landscape-scale carbon dynamics
Sensitivity of source sediment fingerprinting to tracer selection methods
Response of soil nutrients and erodibility to slope aspect in the northern agro-pastoral ecotone, China
Mapping land degradation risk due to land susceptibility to dust emission and water erosion
Validating plutonium-239+240 as a novel soil redistribution tracer – a comparison to measured sediment yield
Quantification of the effects of long-term straw return on soil organic matter spatiotemporal variation: a case study in a typical black soil region
Does soil thinning change soil erodibility? An exploration of long-term erosion feedback systems
Dynamics of carbon loss from an Arenosol by a forest to vineyard land use change on a centennial scale
The effect of tillage depth and traffic management on soil properties and root development during two growth stages of winter wheat (Triticum aestivum L.)
Potential effect of wetting agents added to agricultural sprays on the stability of soil aggregates
Environmental behaviors of (E) pyriminobac-methyl in agricultural soils
The effect of natural infrastructure on water erosion mitigation in the Andes
Spatial distribution of argan tree influence on soil properties in southern Morocco
Assessing soil redistribution of forest and cropland sites in wet tropical Africa using 239+240Pu fallout radionuclides
Significant soil degradation is associated with intensive vegetable cropping in a subtropical area: a case study in southwestern China
Spatial variations, origins, and risk assessments of polycyclic aromatic hydrocarbons in French soils
Complex soil food web enhances the association between N mineralization and soybean yield – a model study from long-term application of a conservation tillage system in a black soil of Northeast China
Understanding the role of water and tillage erosion from 239+240Pu tracer measurements using inverse modelling
Variation of soil organic carbon, stable isotopes, and soil quality indicators across an erosion–deposition catena in a historical Spanish olive orchard
Impacts of land use and topography on soil organic carbon in a Mediterranean landscape (north-western Tunisia)
Spatial assessments of soil organic carbon for stakeholder decision-making – a case study from Kenya
How serious a problem is subsoil compaction in the Netherlands? A survey based on probability sampling
Enzymatic biofilm digestion in soil aggregates facilitates the release of particulate organic matter by sonication
Exploring the linkage between spontaneous grass cover biodiversity and soil degradation in two olive orchard microcatchments with contrasting environmental and management conditions
Determination of hydrological roughness by means of close range remote sensing
Can we manipulate root system architecture to control soil erosion?
SF3M software: 3-D photo-reconstruction for non-expert users and its application to a gully network
Gully geometry: what are we measuring?
Short-term recovery of soil physical, chemical, micro- and mesobiological functions in a new vineyard under organic farming
Ecological soil quality affected by land use and management on semi-arid Crete
Identification of sensitive indicators to assess the interrelationship between soil quality, management practices and human health
Wolde Mekuria, Euan Phimister, Getahun Yakob, Desalegn Tegegne, Awdenegest Moges, Yitna Tesfaye, Dagmawi Melaku, Charlene Gerber, Paul Hallett, and Jo Smith
EGUsphere, https://doi.org/10.5194/egusphere-2024-1125, https://doi.org/10.5194/egusphere-2024-1125, 2024
Short summary
Short summary
Working with farmers in a watershed in Southern Ethiopia, we investigated (a) the effectiveness of low-cost gully rehabilitation measures to reduce soil loss and upward expansion of gully heads, and (b) how farmers and communities view gully interventions. Over a period of 26 months, low-cost practices ceased measurable gully head expansion, whereas untreated gullies had a mean upward expansion of 671 cm resulting in a calculated soil loss of 11.0 tonnes.
Lena Katharina Öttl, Florian Wilken, Anna Juřicová, Pedro V. G. Batista, and Peter Fiener
SOIL, 10, 281–305, https://doi.org/10.5194/soil-10-281-2024, https://doi.org/10.5194/soil-10-281-2024, 2024
Short summary
Short summary
Our long-term modelling study examines the effects of multiple soil redistribution processes on carbon dynamics in a 200 km² catchment converted from natural forest to agriculture about 1000 years ago. The modelling results stress the importance of including tillage erosion processes and long-term land use and land management changes to understand current soil-redistribution-induced carbon fluxes at the landscape scale.
Thomas Chalaux-Clergue, Rémi Bizeul, Pedro V. G. Batista, Núria Martínez-Carreras, J. Patrick Laceby, and Olivier Evrard
SOIL, 10, 109–138, https://doi.org/10.5194/soil-10-109-2024, https://doi.org/10.5194/soil-10-109-2024, 2024
Short summary
Short summary
Sediment source fingerprinting is a relevant tool to support soil conservation and watershed management in the context of accelerated soil erosion. To quantify sediment source contribution, it requires the selection of relevant tracers. We compared the three-step method and the consensus method and found very contrasted trends. The divergences between virtual mixtures and sample prediction ranges highlight that virtual mixture statistics are not directly transferable to actual samples.
Yuxin Wu, Guodong Jia, Xinxiao Yu, Honghong Rao, Xiuwen Peng, Yusong Wang, Yushi Wang, and Xu Wang
SOIL, 10, 61–75, https://doi.org/10.5194/soil-10-61-2024, https://doi.org/10.5194/soil-10-61-2024, 2024
Short summary
Short summary
Vegetation restoration is an important method of ecological restoration that aims to control soil erosion and prevent soil degradation. Our study suggests that combinations of species such as C. korshinskii and L. bicolor are optimal for improving the soil nutrients and soil erodibility for any slope aspect. This study provides insight into the rational planning of vegetation restoration measures for slopes with various aspects in semi-arid areas of the northern agro-pastoral ecotone.
Mahdi Boroughani, Fahimeh Mirchooli, Mojtaba Hadavifar, and Stephanie Fiedler
SOIL, 9, 411–423, https://doi.org/10.5194/soil-9-411-2023, https://doi.org/10.5194/soil-9-411-2023, 2023
Short summary
Short summary
The present study used several different datasets, conducted a field survey, and paired the data with three different machine learning algorithms to construct spatial maps for areas at risk of land degradation for the Lut watershed in Iran. According to the land degradation map, almost the entire study region is at risk. A large fraction of 43 % of the area is prone to both high wind-driven and water-driven soil erosion.
Katrin Meusburger, Paolo Porto, Judith Kobler Waldis, and Christine Alewell
SOIL, 9, 399–409, https://doi.org/10.5194/soil-9-399-2023, https://doi.org/10.5194/soil-9-399-2023, 2023
Short summary
Short summary
Quantifying soil redistribution rates is a global challenge. Radiogenic tracers such as plutonium, namely 239+240Pu, released to the atmosphere by atmospheric bomb testing in the 1960s are promising tools to quantify soil redistribution. Direct validation of 239+240Pu as soil redistribution is, however, still missing. Here, we used a unique sediment yield time series in southern Italy, reaching back to the initial fallout of 239+240Pu to verify 239+240Pu as a soil redistribution tracer.
Yang Yan, Wenjun Ji, Baoguo Li, Guiman Wang, Songchao Chen, Dehai Zhu, and Zhong Liu
SOIL, 9, 351–364, https://doi.org/10.5194/soil-9-351-2023, https://doi.org/10.5194/soil-9-351-2023, 2023
Short summary
Short summary
The response rate of soil organic matter (SOM) to the amount of straw return was inversely proportional to the initial SOM and the sand contents. From paddy to dryland, the SOM loss decreased with the increased amount of straw return. The SOM even increased by 1.84 g kg-1 when the straw return amount reached 60–100%. The study revealed that straw return is beneficial to carbon sink in farmland and is a way to prevent a C source caused by the change of paddy field to upland.
Pedro V. G. Batista, Daniel L. Evans, Bernardo M. Cândido, and Peter Fiener
SOIL, 9, 71–88, https://doi.org/10.5194/soil-9-71-2023, https://doi.org/10.5194/soil-9-71-2023, 2023
Short summary
Short summary
Most agricultural soils erode faster than new soil is formed, which leads to soil thinning. Here, we used a model simulation to investigate how soil erosion and soil thinning can alter topsoil properties and change its susceptibility to erosion. We found that soil profiles are sensitive to erosion-induced changes in the soil system, which mostly slow down soil thinning. These findings are likely to impact how we estimate soil lifespans and simulate long-term erosion dynamics.
Solène Quéro, Christine Hatté, Sophie Cornu, Adrien Duvivier, Nithavong Cam, Floriane Jamoteau, Daniel Borschneck, and Isabelle Basile-Doelsch
SOIL, 8, 517–539, https://doi.org/10.5194/soil-8-517-2022, https://doi.org/10.5194/soil-8-517-2022, 2022
Short summary
Short summary
Although present in food security key areas, Arenosols carbon stocks are barely studied. A 150-year-old land use change in a Mediterranean Arenosol showed a loss from 50 Gt C ha-1 to 3 Gt C ha-1 after grape cultivation. 14C showed that deep ploughing in a vineyard plot redistributed the remaining microbial carbon both vertically and horizontally. Despite the drastic degradation of the organic matter pool, Arenosols would have a high carbon storage potential, targeting the 4 per 1000 initiative.
David Hobson, Mary Harty, Saoirse R. Tracy, and Kevin McDonnell
SOIL, 8, 391–408, https://doi.org/10.5194/soil-8-391-2022, https://doi.org/10.5194/soil-8-391-2022, 2022
Short summary
Short summary
Tillage practices and traffic management have significant implications for root architecture, plant growth, and, ultimately, crop yield. Soil cores were extracted from a long-term tillage trial to measure the relationship between soil physical properties and root growth. We found that no-traffic and low-tyre-pressure methods significantly increased rooting properties and crop yield under zero-tillage conditions compared to conventionally managed deep-tillage treatments with high tyre pressures.
Antonín Kintl, Vítězslav Vlček, Martin Brtnický, Jan Nedělník, and Jakub Elbl
SOIL, 8, 349–372, https://doi.org/10.5194/soil-8-349-2022, https://doi.org/10.5194/soil-8-349-2022, 2022
Short summary
Short summary
We have started to address this issue because the application of wetting agents is very widespread within the European Union and is often considered desirable because it increases the effectiveness of pesticides. While pesticides are thoroughly tested for their impact on the environment as a whole, testing for the effects of wetting agents is minimal. Today, there is no research on their impact on the soil environment.
Wenwen Zhou, Haoran Jia, Lang Liu, Baotong Li, Yuqi Li, and Meizhu Gao
SOIL, 8, 237–252, https://doi.org/10.5194/soil-8-237-2022, https://doi.org/10.5194/soil-8-237-2022, 2022
Short summary
Short summary
Our study focuses on (E) pyriminobac-methyl (EPM), a weedicide commonly applied to agricultural soils in China, which can potentially pose serious risks to groundwater quality once it percolates through the soil. We tested the adsorption–desorption, degradation, and leaching of this compound in five agricultural soils sampled from different provinces in China.
Veerle Vanacker, Armando Molina, Miluska A. Rosas, Vivien Bonnesoeur, Francisco Román-Dañobeytia, Boris F. Ochoa-Tocachi, and Wouter Buytaert
SOIL, 8, 133–147, https://doi.org/10.5194/soil-8-133-2022, https://doi.org/10.5194/soil-8-133-2022, 2022
Short summary
Short summary
The Andes region is prone to natural hazards due to its steep topography and climatic variability. Anthropogenic activities further exacerbate environmental hazards and risks. This systematic review synthesizes the knowledge on the effectiveness of nature-based solutions. Conservation of natural vegetation and implementation of soil and water conservation measures had significant and positive effects on soil erosion mitigation and topsoil organic carbon concentrations.
Mario Kirchhoff, Tobias Romes, Irene Marzolff, Manuel Seeger, Ali Aït Hssaine, and Johannes B. Ries
SOIL, 7, 511–524, https://doi.org/10.5194/soil-7-511-2021, https://doi.org/10.5194/soil-7-511-2021, 2021
Short summary
Short summary
This study found that the influence of argan trees on soil properties in southern Morocco is mostly limited to the area covered by the tree crown. However, the tree influences the bare soil outside the crown positively in specific directions because wind and water can move litter and soil particles from under the tree to the areas between the trees. These findings, based on soil samples around argan trees, could help structure reforestation measures.
Florian Wilken, Peter Fiener, Michael Ketterer, Katrin Meusburger, Daniel Iragi Muhindo, Kristof van Oost, and Sebastian Doetterl
SOIL, 7, 399–414, https://doi.org/10.5194/soil-7-399-2021, https://doi.org/10.5194/soil-7-399-2021, 2021
Short summary
Short summary
This study demonstrates the usability of fallout radionuclides 239Pu and 240Pu as a tool to assess soil degradation processes in tropical Africa, which is particularly valuable in regions with limited infrastructure and challenging monitoring conditions for landscape-scale soil degradation monitoring. The study shows no indication of soil redistribution in forest sites but substantial soil redistribution in cropland (sedimentation >40 cm in 55 years) with high variability.
Ming Lu, David S. Powlson, Yi Liang, Dave R. Chadwick, Shengbi Long, Dunyi Liu, and Xinping Chen
SOIL, 7, 333–346, https://doi.org/10.5194/soil-7-333-2021, https://doi.org/10.5194/soil-7-333-2021, 2021
Short summary
Short summary
Land use changes are an important anthropogenic perturbation that can cause soil degradation, but the impacts of land conversion from growing cereals to vegetables have received little attention. Using a combination of soil analyses from paired sites and data from farmer surveys, we found significant soil degradation in intensive vegetable cropping under paddy rice–oilseed rape rotation in southwestern China. This study may alert others to the potential land degradation in the subtropics.
Claire Froger, Nicolas P. A. Saby, Claudy C. Jolivet, Line Boulonne, Giovanni Caria, Xavier Freulon, Chantal de Fouquet, Hélène Roussel, Franck Marot, and Antonio Bispo
SOIL, 7, 161–178, https://doi.org/10.5194/soil-7-161-2021, https://doi.org/10.5194/soil-7-161-2021, 2021
Short summary
Short summary
Pollution of French soils by polycyclic aromatic hydrocarbons (PAHs), known as carcinogenic pollutants, was quantified in this work using an extended data set of 2154 soils sampled across France. The map of PAH concentrations in French soils revealed strong trends in regions with heavy industries and around cities. The PAH signatures indicated the influence of PAH emissions in Europe during the industrial revolution. Health risks posed by PAHs in soils were low but need to be considered.
Shixiu Zhang, Liang Chang, Neil B. McLaughlin, Shuyan Cui, Haitao Wu, Donghui Wu, Wenju Liang, and Aizhen Liang
SOIL, 7, 71–82, https://doi.org/10.5194/soil-7-71-2021, https://doi.org/10.5194/soil-7-71-2021, 2021
Short summary
Short summary
Long-term conservation tillage results in more complex and heterogeneous activities of soil organisms relative to conventional tillage. This study used an energetic food web modelling approach to calculate the mineralized N delivered by the whole soil community assemblages and highlighted the essential role of soil food web complexity in coupling N mineralization and soybean yield after a 14-year application of conservation tillage in a black soil of Northeast China.
Florian Wilken, Michael Ketterer, Sylvia Koszinski, Michael Sommer, and Peter Fiener
SOIL, 6, 549–564, https://doi.org/10.5194/soil-6-549-2020, https://doi.org/10.5194/soil-6-549-2020, 2020
Short summary
Short summary
Soil redistribution by water and tillage erosion processes on arable land is a major threat to sustainable use of soil resources. We unravel the role of tillage and water erosion from fallout radionuclide (239+240Pu) activities in a ground moraine landscape. Our results show that tillage erosion dominates soil redistribution processes and has a major impact on the hydrological and sedimentological connectivity, which started before the onset of highly mechanised farming since the 1960s.
José A. Gómez, Gema Guzmán, Arsenio Toloza, Christian Resch, Roberto García-Ruíz, and Lionel Mabit
SOIL, 6, 179–194, https://doi.org/10.5194/soil-6-179-2020, https://doi.org/10.5194/soil-6-179-2020, 2020
Short summary
Short summary
The long-term evolution of soil organic carbon in an olive orchard (planted in 1856) was evaluated and compared to an adjacent undisturbed natural area. Total soil organic carbon in the top 40 cm of the soil in the orchard was reduced to 25 % of that in the undisturbed area. The deposition downslope in the orchard of sediment coming from the eroded upslope area did not increase the accumulation of organic carbon in soil, but it quadrupled available phosphorus and improved overall soil quality.
Donia Jendoubi, Hanspeter Liniger, and Chinwe Ifejika Speranza
SOIL, 5, 239–251, https://doi.org/10.5194/soil-5-239-2019, https://doi.org/10.5194/soil-5-239-2019, 2019
Short summary
Short summary
This paper is original research done in north-western Tunisia; it presents the impacts of the topography (slope and aspect) and the land use systems in the SOC storage in a Mediterranean area. It provides a soil spectral library, describes the variation of SOC under different conditions, and highlights the positive impact of agroforestry as good management in improving the SOC. Therefore this finding is very important to support decision making and inform sustainable land management in Tunisia.
Tor-Gunnar Vågen, Leigh Ann Winowiecki, Constance Neely, Sabrina Chesterman, and Mieke Bourne
SOIL, 4, 259–266, https://doi.org/10.5194/soil-4-259-2018, https://doi.org/10.5194/soil-4-259-2018, 2018
Short summary
Short summary
Land degradation impacts the health and livelihoods of about 1.5 billion people worldwide. The state of the environment and food security are strongly interlinked in tropical landscapes. This paper demonstrates the integration of soil organic carbon (SOC) and land health maps with socioeconomic datasets into an online, open-access platform called the Resilience Diagnostic and Decision Support Tool for Turkana County in Kenya.
Dick J. Brus and Jan J. H. van den Akker
SOIL, 4, 37–45, https://doi.org/10.5194/soil-4-37-2018, https://doi.org/10.5194/soil-4-37-2018, 2018
Short summary
Short summary
Subsoil compaction is an important soil threat. It is caused by heavy machines used in agriculture. The aim of this study was to estimate how large the area with overcompacted subsoils is in the Netherlands. This was done by selecting locations randomly and determining the porosity and bulk density of the soil at these locations. It appeared that 43 % of the soils in the Netherlands is overcompacted, and so we conclude that subsoil compaction is indeed a serious problem in the Netherlands.
Frederick Büks and Martin Kaupenjohann
SOIL, 2, 499–509, https://doi.org/10.5194/soil-2-499-2016, https://doi.org/10.5194/soil-2-499-2016, 2016
Short summary
Short summary
Soil aggregate stability and POM occlusion are integral markers for soil quality. Besides physico-chemical interactions, biofilms are considered to aggregate primary particles, but experimental proof is still missing. In our experiment, soil aggregate samples were treated with biofilm degrading enzymes and showed a reduced POM occlusion and an increased bacteria DNA release compared with untreated samples. Thus, biofilms are assumed to be an important factor of POM occlusion in soil aggregates.
E. V. Taguas, C. Arroyo, A. Lora, G. Guzmán, K. Vanderlinden, and J. A. Gómez
SOIL, 1, 651–664, https://doi.org/10.5194/soil-1-651-2015, https://doi.org/10.5194/soil-1-651-2015, 2015
Short summary
Short summary
Biodiversity indices for spontaneous grass cover were measured in two olive orchards in southern Spain with contrasting site conditions and management to evaluate their potential for biodiversity metrics of soil degradation. Biodiversity indices were relatively high for agricultural areas. No correlation between the biodiversity indicators and soil quality features were observed. The mere use of vegetation presence as a proxy might mask relative intense soil degradation processes.
A. Kaiser, F. Neugirg, F. Haas, J. Schmidt, M. Becht, and M. Schindewolf
SOIL, 1, 613–620, https://doi.org/10.5194/soil-1-613-2015, https://doi.org/10.5194/soil-1-613-2015, 2015
A. Ola, I. C. Dodd, and J. N. Quinton
SOIL, 1, 603–612, https://doi.org/10.5194/soil-1-603-2015, https://doi.org/10.5194/soil-1-603-2015, 2015
Short summary
Short summary
Plant roots are crucial in soil erosion control. Moreover, some species respond to nutrient-rich patches by lateral root proliferation. At the soil surface dense mats of roots may block soil pores thereby limiting infiltration, enhancing runoff; whereas at depth local increases in shear strength may reinforce soils at the shear plane. This review considers the potential of manipulating plant roots to control erosion.
C. Castillo, M. R. James, M. D. Redel-Macías, R. Pérez, and J. A. Gómez
SOIL, 1, 583–594, https://doi.org/10.5194/soil-1-583-2015, https://doi.org/10.5194/soil-1-583-2015, 2015
Short summary
Short summary
- We present SF3M, a new graphical user interface for implementing a complete 3-D photo-reconstruction workflow based on freely available software, in combination with a low-cost survey design for the reconstruction of a several-hundred-metres-long gully network.
- This methodology implied using inexpensive means, little manpower, in a short time span, being a promising tool for gully erosion evaluation in scenarios with demanding budget and time constraints and reduced operator expertise.
J. Casalí, R. Giménez, and M. A. Campo-Bescós
SOIL, 1, 509–513, https://doi.org/10.5194/soil-1-509-2015, https://doi.org/10.5194/soil-1-509-2015, 2015
Short summary
Short summary
Despite gullies having been intensively studied in the past decades, there is no general consensus on such basic aspects as the correct determination of the geometry (width and depth) of these erosion features. Therefore, a measurement protocol is proposed to characterize the geometry of a gully by its effective width and effective depth, which, together with its length, would permit the definition of the equivalent prismatic gully (EPG); this would facilitate the comparison between gullies.
E. A. C. Costantini, A. E. Agnelli, A. Fabiani, E. Gagnarli, S. Mocali, S. Priori, S. Simoni, and G. Valboa
SOIL, 1, 443–457, https://doi.org/10.5194/soil-1-443-2015, https://doi.org/10.5194/soil-1-443-2015, 2015
Short summary
Short summary
Earthworks carried out before planting a new vineyard caused, in the surface soil layer, an increase in lime and a decline in soil OC and N contents, along with a reduction in the abundance and diversity of microbial and mesofauna communities. Five years after the new vineyard establishment, soil was still far from its original quality and this limited vine development. The reduced OM input resulting from the management and the poor residue biomass was a major factor in delaying soil resilience.
J. P. van Leeuwen, D. Moraetis, G. J. Lair, J. Bloem, N. P. Nikolaidis, L. Hemerik, and P. C. de Ruiter
SOIL Discuss., https://doi.org/10.5194/soild-2-187-2015, https://doi.org/10.5194/soild-2-187-2015, 2015
Manuscript not accepted for further review
R. Zornoza, J. A. Acosta, F. Bastida, S. G. Domínguez, D. M. Toledo, and A. Faz
SOIL, 1, 173–185, https://doi.org/10.5194/soil-1-173-2015, https://doi.org/10.5194/soil-1-173-2015, 2015
Cited articles
Abdu, N., Abdullahi, A. A., and Abdulkadir, A.: Heavy metals and soil microbes,
Environ. Chem. Lett., 15, 65–84,
https://doi.org/10.1007/s10311-016-0587-x, 2017.
Ahmad, I., Hayat, S., Ahmad, A., and Inam, A.: Effect of heavy metal on survival
of certain groups of indigenous soil microbial population, J. Appl. Sci.
Environ. Mgt., 9, 115–121, 2005.
Arambašić, M. B., Bjelić, S., and Subakov, G.: Acute toxicity of
heavy metals (copper, lead, zinc), phenol and sodium on Allium cepa L., Lepidium sativum L. and Daphnia magna St.: Comparative
investigations and the practical applications, Water Res., 29, 497–503,
https://doi.org/10.1016/0043-1354(94)00178-A, 1995.
Bååth, E.: Effects of heavy metals in soil on microbial processes and
populations (a review), Water Air Soil Pollut., 47, 335–379, https://doi.org/10.1007/BF00279331, 1989.
Bååth, E.: Measurement of heavy metal tolerance of soil bacteria
using thymidine incorporation into bacteria extracted after
homogenization-centrifugation, Soil Boil. Biochem., 24, 1167–1172,
https://doi.org/10.1016/0038-0717(92)90067-8, 1992.
Bååth, E.: Thymidine and leucine incorporation in soil bacteria with
different cell size, Microb. Ecol., 27, 267–278, https://doi.org/10.1007/BF00182410, 1994.
Bååth, E., Petterson, M., and Söderberg, K. H.: Adaptation of a rapid
and economical microcentrifugation method to measure thymidine and leucine
incorporation by soil bacteria, Soil Biol. Biochem., 33, 1571–1574, https://doi.org/10.1016/S0038-0717(01)00073-6, 2001.
Berg, J., Thorsen, M. K., Holm, P. E., Jensen, J., Nybroe, O., and Brandt, K.
K.: Cu exposure under field conditions coselects for antibiotic resistance as
determined by a novel cultivation-independent bacterial community tolerance
assay, Environ. Sci. Technol., 44, 8724–8728, https://doi.org/10.1021/es101798r, 2010.
Blanck, H.: A critical review of procedures and approaches used for assessing
pollution-induced community tolerance (PICT) in biotic communities, Hum.
Ecol. Risk Assess., 8, 1003–1034, https://doi.org/10.1080/1080-700291905792, 2002.
Boxall, A. B., Kolpin, D. W., Halling-Sørensen, B., and Tolls, J.: Peer
reviewed: are veterinary medicines causing environmental risks?, Environ.
Sci. Technol., 37, 286A–294A, 2003.
Caban, J. R., Kuppusamy, S., Kim, J. H., Yoon, Y. E., Kim, S. Y., and Lee,
Y. B.: Green manure amendment enhances microbial activity and diversity in
antibiotic-contaminated soil, Appl. Soil Ecol., 129, 72–76, https://doi.org/10.1016/j.apsoil.2018.04.013, 2018.
Cao, J., Yang, G., Mai, Q., Zhuang, Z., and Zhuang, L.: Co-selection of
antibiotic-resistant bacteria in a paddy soil exposed to as (III)
contamination with an emphasis on potential pathogens, Sci. Total Environ.,
725, 138367, https://doi.org/10.1016/j.scitotenv.2020.138367,
2020.
Chien, C., Yumei, K. U. O., Changchieh, C. H. E. N., Chunwei, H. U. N. G.,
Chihwei, Y. E. H., and Weijen, Y. E. H.: Microbial diversity of soil bacteria in
agricultural field contaminated with heavy metals, J. Environ. Sci., 20,
359–363, https://doi.org/10.1016/S1001-0742(08)60056-X, 2008.
Conde-Cid, M., Álvarez-Esmorís, C., Paradelo-Núñez, R.,
Nóvoa-Muñoz, J. C., Arias-Estévez, M.,
Álvarez-Rodríguez, E., Fernández-Sanjurjo, M. J.,
and Núñez-Delgado, A.: Occurrence of tetracyclines and sulfonamides in
manures, agricultural soils and crops from different areas in Galicia (NW
Spain), J. Clean. Prod., 197, 491–500, https://doi.org/10.1016/j.jclepro.2018.06.217, 2018.
Cruz-Paredes, C., Wallander, H., Kjøller, R., and Rousk, J.: Using community
trait-distributions to assign microbial responses to pH changes and Cd in
forest soils treated with wood ash, Soil Biol. Biochem., 112, 153–164,
https://doi.org/10.1016/j.soilbio.2017.05.004, 2017.
Díaz-Raviña, M., Bååth, E., and Frostegård, Å.: Multiple
heavy metal tolerance of soil bacterial communities and its measurement by a
thymidine incorporation technique, Appl. Environ. Microbiol., 60, 2238–2247,
https://doi.org/10.1128/aem.60.7.2238-2247.1994, 1994.
Díaz-Raviña, M. and Bååth, E.: Development of metal tolerance
in soil bacterial communities exposed to experimentally increased metal
levels, Appl. Environ. Microbiol., 62, 2970–2977, https://doi.org/10.1128/aem.62.8.2970-2977.1996, 1996.
Díaz-Raviña, M. and Bååth, E.: Response of soil bacterial
communities pre-exposed to different metals and reinoculated in an
unpolluted soil, Soil Biol. Biochem., 33, 241–248, https://doi.org/10.1016/S0038-0717(00)00136-X, 2001.
Dickinson, A. W., Power, A., Hansen, M. G., Brandt, K. K., Piliposian, G.,
Appleby, P., O'Neill, P. A., Jones, R. T., Sierocinski, P., Koskella, B., and Vos,
M.: Heavy metal pollution and co-selection for antibiotic resistance: A
microbial palaeontology approach, Environ. Int., 132, 105117, https://doi.org/10.1016/j.envint.2019.105117, 2019.
Dirilgen, N.: Accumulation of heavy metals in freshwater organisms:
Assessment of toxic interactions, Turk. J. Chem., 25, 173–179, 2001.
European Medicines Agency: European surveillance of veterinary antimicrobial
consumption, in: Sales of Veterinary Antimicrobial Agents in 29 European
Countries in 2014, (EMA/61769/2016), https://doi.org/10.2809/676974, 2016.
Fernández-Calviño, D. and Bååth, E.: Co-selection for antibiotic
tolerance in Cu-polluted soil is detected at higher Cu-concentrations than
increased Cu-tolerance, Soil Biol. Biochem., 57, 953–956, https://doi.org/10.1016/j.soilbio.2012.08.017, 2013.
Fernández-Calviño, D. and Bååth, E.: Interaction between pH and
Cu toxicity on fungal and bacterial performance in soil, Soil Biol.
Biochem., 96, 20–29, https://doi.org/10.1016/j.soilbio.2016.01.010, 2016.
Forsberg, K. J., Reyes, A., Wang, B., Selleck, E. M., Sommer, M. O. A., and Dantas,
G.: The shared antibiotic resistome of soil bacteria and human pathogens,
Science, 337, 1107–1111, https://doi.org/10.1126/science.1220761, 2012.
Giller, K. E., Witter, E., and McGrath, S. P.: Heavy metals and soil microbes,
Soil Biol. Biochem., 41, 2031–2037, https://doi.org/10.1016/j.soilbio.2009.04.026, 2009.
Hamscher, G., Sczesny, S., Höper, H., and Nau, H.: Determination of
persistent tetracycline residues in soil fertilized with liquid manure by
high-performance liquid chromatography with electrospray ionization tandem
mass spectrometry, Anal. Chem., 74, 1509–1518, https://doi.org/10.1021/ac015588m, 2002.
Hattori, H.: Influence of heavy metals on soil microbial activities, Soil
Sci. Plant Nutr., 38, 93–100, https://doi.org/10.1080/00380768.1992.10416956, 1992.
Hölzel, C. S., Müller, C., Harms, K. S., Mikolajewski, S.,
Schäfer, S., Schwaiger, K., and Bauer, J.: Heavy metals in liquid pig
manure in light of bacterial antimicrobial resistance, Environ. Res., 113,
21–27, https://doi.org/10.1016/j.envres.2012.01.002, 2012.
Hsieh, C. Y., Tsai, M. H., Ryan, D. K., and Pancorbo, O. C.: Toxicity of the 13
priority pollutant metals to Vibrio fisheri in the Microtox®
chronic toxicity test, Sci. Total Environ., 320, 37–50, https://doi.org/10.1016/S0048-9697(03)00451-0, 2004.
Huang, S. S., Liao, Q. L., Hua, M., Wu, X. M., Bi, K. S., Yan, C. Y., Chen
B., and Zhang, X. Y.: Survey of heavy metal pollution and assessment of
agricultural soil in Yangzhong district, Jiangsu Province, China,
Chemosphere, 67, 2148–2155, https://doi.org/10.1016/j.chemosphere.2006.12.043, 2007.
Huynh, H. and Bulich, A.: Measuring chronic toxicity using luminescent bacteria
(No. CONF-9410273-), Society of Environmental Toxicology and Chemistry,
Pensacola, FL (United States), 1994.
Ji, X., Shen, Q., Liu, F., Ma, J., Xu, G., Wang, Y., and Wu, M.: Antibiotic
resistance gene abundances associated with antibiotics and heavy metals in
animal manures and agricultural soils adjacent to feedlots in Shanghai,
China, J. Hazard. Mater., 235, 178–185, https://doi.org/10.1016/j.jhazmat.2012.07.040, 2012.
Kabata-Pendias, A.: Trace elements in soils and plants, CRC press,
https://doi.org/10.1201/9781420039900, 2000.
Komárek, M., Čadková, E., Chrastný, V., Bordas, F.,
and Bollinger, J. C.: Contamination of vineyard soils with fungicides: a review
of environmental and toxicological aspects, Environ. Int., 36, 138–151,
https://doi.org/10.1016/j.envint.2009.10.005, 2010.
Kornegay, E. T., Hedges, J. D., Martens, D. C., and Kramer, C. Y.: Effect on soil
and plant mineral levels following application of manures of different
copper contents, Plant Soil., 45, 151–162, https://doi.org/10.1007/BF00011137, 1976.
Lakanen, E. and Erviö, R: A comparison of eight extractants
for the determination of plant available micronutrients in soils, Acta
Agric. Fenn., 123, 223–232, 1971.
Li, J., Yu, H., and Luan, Y.: Meta-analysis of the copper, zinc, and cadmium
absorption capacities of aquatic plants in heavy metal-polluted water, Int.
J. Environ. Res. Public Health., 12, 14958–14973, https://doi.org/10.3390/ijerph121214959, 2015.
Liu, W. R., Zeng, D., She, L., Su, W. X., He, D. C., Wu, G. Y., Ma, X. R.,
Jiang, S., Jiang C.H., and Ying, G. G.: Comparisons of pollution
characteristics, emission situations, and mass loads for heavy metals in the
manures of different livestock and poultry in China, Sci. Total
Environ., 734, 139023, https://doi.org/10.1016/j.scitotenv.2020.139023, 2020.
Macías, F. and Calvo, R.: Niveles genéricos de referencia de metales
pesados y otroselementos traza en suelos de Galicia (Reference values for
heavy metals and other traceelements in soils in Galicia), in:
Consellería de Medio Ambiente e Desenvolvemento Sostible, Xunta de
Galicia, Santiago de Compostela, p. 229, ISBN 978-84-453-4664-8, 2008.
Mazhar, S. H., Li, X., Rashid, A., Su, J., Xu, J., Brejnrod, A. D., Sue
J.-Q., Wu Y., Zhu Y.-G., Zhou S. G., and Rensing, C.: Co-selection of antibiotic
resistance genes, and mobile genetic elements in the presence of heavy
metals in poultry farm environments, Sci. Total Environ., 755, 142702,
https://doi.org/10.1016/j.scitotenv.2020.142702, 2021.
Meisner, A., Bååth, E., and Rousk, J.: Microbial growth responses upon
rewetting soil dried for four days or one year, Soil Biol. Biochem., 66,
188–192, https://doi.org/10.1016/j.soilbio.2013.07.014, 2013.
Mirlean, N., Roisenberg, A., and Chies, J. O.: Metal contamination of vineyard soils in wet subtropics (southern Brazil), Environ. Pollut., 149, 10–17, https://doi.org/10.1016/j.envpol.2006.12.024, 2007.
Nannipieri, P., Badalucco, L., Landi, L., and Pietramellara, G.: Measurement in
assessing the risk of chemicals to the soil ecosystem, in: Ecotoxicology:
Responses, Biomarkers and Risk Assessment, edited by: Zelikoff, J. T., Fair Haven, NJ, SOS Publications, 507–534, 1997.
Neuhauser, E. F., Loehr, R. C., Milligan, D. L., and Malecki, M. R.: Toxicity of
metals to the earthworm Eisenia fetida, Biol. Fertil. Soils., 1, 149–152, https://doi.org/10.1007/BF00301782, 1985.
Nicholson, F. A., Smith, S. R., Alloway, B. J., Carlton-Smith, C., and Chambers,
B. J.: An inventory of heavy metals inputs to agricultural soils in England
and Wales, Sci. Total Environ., 311, 205–219, https://doi.org/10.1016/S0048-9697(03)00139-6, 2003.
Novozamsky, I., Lexmond, T. H. M., and Houba, V. J. G.: A single extraction
procedure of soil for evaluation of uptake of some heavy metals by plants,
Int. J. Environ. Anal. Chem., 51, 47–58, https://doi.org/10.1080/03067319308027610, 1993.
Pan, X., Qiang, Z., Ben, W., and Chen, M.: Residual veterinary antibiotics in
swine manure from concentrated animal feeding operations in Shandong
Province, China, Chemosphere, 84, 695–700,
https://doi.org/10.1016/j.chemosphere.2011.03.022, 2011.
Sager, M.: Trace and nutrient elements in manure, dung and compost samples in
Austria, Soil Biol. Biochem., 39, 1383–1390, https://doi.org/10.1016/j.soilbio.2006.12.015, 2007.
Santás-Miguel, V., Arias-Estévez, M., Díaz-Raviña, M.,
Fernández-Sanjurjo, M. J., Álvarez-Rodríguez, E.,
Núñez-Delgado, A., and Fernández-Calviño, D.: Bacterial Community
Tolerance to Tetracycline Antibiotics in Cu Polluted Soils, Agronomy, 10,
1220, https://doi.org/10.3390/agronomy10091220, 2020a.
Santás-Miguel, V., Arias-Estévez, M., Díaz-Raviña, M.,
Fernández-Sanjurjo, M. J., Álvarez-Rodríguez, E.,
Núñez-Delgado, A., and Fernández-Calviño, D.: Interactions
between soil properties and tetracycline toxicity affecting to bacterial
community growth in agricultural soil, Appl. Soil Ecol., 147, 103437,
https://doi.org/10.1016/j.apsoil.2019.103437, 2020b.
Santás-Miguel, V., Arias-Estévez, M., Díaz-Raviña, M.,
Fernández-Sanjurjo, M. J., Álvarez-Rodríguez, E.,
Núñez-Delgado, A., and Fernández-Calviño, D.: Effect of
oxytetracycline and chlortetracycline on bacterial community growth in
agricultural soils, Agronomy, 10, 1011, https://doi.org/10.3390/agronomy10071011, 2020c.
Sarma, B., Acharya, C., and Joshi, S. R.: Pseudomonads: a versatile bacterial
group exhibiting dual resistance to metals and antibiotics, Afr. J.
Microbiol. Res., 4, 2828–2835, 2010.
Sarmah, A. K., Meyer, M. T., and Boxall, A. B.: A global perspective on the use,
sales, exposure pathways, occurrence, fate and effects of veterinary
antibiotics (VAs) in the environment, Chemosphere, 65, 725–759, 2006.
Smolders, E., Buekers, J., Oliver, I., and McLaughlin, M. J.: Soil properties
affecting toxicity of zinc to soil microbial properties in laboratory-spiked
and field-contaminated soils, Environ. Toxicol. Chem., 23, 2633–2640,
https://doi.org/10.1897/04-27, 2004.
Song, J., Rensing, C., Holm, P. E., Virta, M., and Brandt, K. K.: Comparison of
metals and tetracycline as selective agents for development of tetracycline
resistant bacterial communities in agricultural soil, Environ. Sci.
Technol., 51, 3040–3047, https://doi.org/10.1021/acs.est.6b05342, 2017.
Spiteri, C., Kalinski, V., Rösler, W., Hoffmann, V., and Appel, E.: Magnetic
screening of a pollution hotspot in the Lausitz area, Eastern Germany:
correlation analysis between magnetic proxies and heavy metal contamination
in soils, Environ. Geol., 49, 1–9, https://doi.org/10.1007/s00254-005-1271-9, 2005.
Teodorovic, I., Planojevic, I., Knezevic, P., Radak, S., and Nemet,
I.: Sensitivity of bacterial vs. acute Daphnia magna toxicity tests to
metals, Cent. Eur. J. Biol., 4, 482–492, https://doi.org/10.2478/s11535-009-0048-7, 2009.
Thiele-Bruhn, S. and Beck, I. C.: Effects of sulfonamide and tetracycline
antibiotics on soil microbial activity and microbial biomass, Chemosphere,
59, 457–465, https://doi.org/10.1016/j.chemosphere.2005.01.023, 2005.
Van Boeckel, T. P., Brower, C., Gilbert, M., Grenfell, B. T., Levin, S. A.,
Robinson, T. P., Teillant, A., and Laxminarayan, R.: Global trends in
antimicrobial use in food animals, P. Natl. Acad. Sci. USA, 112,
5649–5654, https://doi.org/10.1073/pnas.1503141112, 2015.
Wang, H., Dong, Y., Yang, Y., Toor, G. S., and Zhang, X.: Changes in heavy
metal contents in animal feeds and manures in an intensive animal production
region of China, J. Environ. Sci., 25, 2435–2442, https://doi.org/10.1016/S1001-0742(13)60473-8, 2013.
Widyasari-Mehta, A., Hartung, S., and Kreuzig, R.: From the application of
antibiotics to antibiotic residues in liquid manures and digestates: A
screening study in one European center of conventional pig husbandry, J.
Environ. Manag., 177, 129–137, https://doi.org/10.1016/j.jenvman.2016.04.012, 2016.
Wu, L., Pan, X., Chen, L., Huang, Y., Teng, Y., Luo, Y., and Christie,
P.: Occurrence and distribution of heavy metals and tetracyclines in
agricultural soils after typical land use change in east China, Environ.
Sci. Pollut. Res., 20, 8342–8354, https://doi.org/10.1007/s11356-013-1532-1, 2013.
Zhang, F., Li, Y., Yang, M., and Li, W.: Content of heavy metals in animal
feeds and manures from farms of different scales in northeast China, Int. J.
Environ. Res. Public Health, 9, 2658–2668, https://doi.org/10.3390/ijerph9082658, 2012.
Zhong, Q., Cruz-Paredes, C., Zhang, S., and Rousk, J.: Can heavy metal pollution
induce bacterial resistance to heavy metals and antibiotics in soils from an
ancient land-mine?, J. Hazard. Mater., 411, 124962, https://doi.org/10.1016/j.jhazmat.2020.124962, 2021.
Zhuang, P., McBride, M. B., Xia, H., Li, N., and Li, Z.: Health risk from heavy
metals via consumption of food crops in the vicinity of Dabaoshan mine,
South China, Sci. Total Environ., 407, 1551–1561, https://doi.org/10.1016/j.scitotenv.2008.10.061, 2009.
Short summary
A laboratory experiment was carried out for 42 d to study co-selection for tolerance of tetracycline (TC), oxytetracycline (OTC), and chlortetracycline (CTC) in soils polluted with heavy metals (As, Cd, Zn, Cu, Ni, Cr, and Pb). At high metal concentrations, the bacterial communities show tolerance to the metal itself, occurring for all the metals tested in the long term. The bacterial communities of the soil polluted with heavy metals also showed long-term co-tolerance to TC, OTC, and CTC.
A laboratory experiment was carried out for 42 d to study co-selection for tolerance of...