Articles | Volume 9, issue 1
https://doi.org/10.5194/soil-9-55-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/soil-9-55-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Soil depth as a driver of microbial and carbon dynamics in a planted forest (Pinus radiata) pumice soil
Bioprotection Aotearoa, Lincoln University, P.O. Box 85084, Lincoln,
7674, New Zealand
Loretta G. Garrett
Scion, Private Bag 3020, Rotorua, 3046, New Zealand
Charlotte Armstrong
Scion, P.O. Box 29237, Riccarton, Christchurch, 8440, New Zealand
Fiona Dean
Scion, Private Bag 3020, Rotorua, 3046, New Zealand
Steve A. Wakelin
Scion, P.O. Box 29237, Riccarton, Christchurch, 8440, New Zealand
Related subject area
Soils and managed ecosystems
Luminescence dating approaches to reconstruct the formation of plaggic anthrosols
High capacity of integrated crop–pasture systems to preserve old soil carbon evaluated in a 60-year-old experiment
Evaluating the Tea Bag Index approach for different management practices in agroecosystems using long-term field experiments in Austria and Sweden
Soil respiration across a variety of tree-covered urban green spaces in Helsinki, Finland
The limited effect of deforestation on stabilized subsoil organic carbon in a subtropical catchment
The impact of agriculture on tropical mountain soils in the western Peruvian Andes: a pedo-geoarchaeological study of terrace agricultural systems in the Laramate region (14.5° S)
Mulch application as the overarching factor explaining increase in soil organic carbon stocks under conservation agriculture in two 8-year-old experiments in Zimbabwe
The QuantiSlakeTest, measuring soil structural stability by dynamic weighing of undisturbed samples immersed in water
Managing soil organic carbon in tropical agroecosystems: evidence from four long-term experiments in Kenya
Impact of contrasting fertilizer technologies on N dynamics from subsurface bands of “pure” or blended fertilizer applications
Wetting and drying cycles, organic amendments, and gypsum play a key role in structure formation and stability of sodic Vertisols
Quality assessment of meta-analyses on soil organic carbon
The role of long-term mineral and manure fertilization on P species accumulation and phosphate-solubilizing microorganisms in paddy red soils
Transforming living labs into lighthouses: a promising policy to achieve land-related sustainable development
What comes after the Sun? On the integration of soil biogeochemical pre-weathering into microplastic experiments
Transition to conservation agriculture: how tillage intensity and covering affect soil physical parameters
Combining colour parameters and geochemical tracers to improve sediment source discrimination in a mining catchment (New Caledonia, South Pacific Islands)
The effects of sealing on urban soil carbon and nutrients
Application of the governance disruptions framework to German agricultural soil policy
Middle Bronze Age land use practices in the northwestern Alpine foreland – a multi-proxy study of colluvial deposits, archaeological features and peat bogs
Spatial variability in heavy metal concentration in urban pavement joints – a case study
Global concentrations of microplastics in soils – a review
Using constructed soils for green infrastructure – challenges and limitations
Effects of microplastic and microglass particles on soil microbial community structure in an arable soil (Chernozem)
Women's agricultural practices and their effects on soil nutrient content in the Nyalenda urban gardens of Kisumu, Kenya
Effects of golf course management on subsurface soil properties in Iowa
Local soil quality assessment of north-central Namibia: integrating farmers' and technical knowledge
How Alexander von Humboldt's life story can inspire innovative soil research in developing countries
Paleosols can promote root growth of recent vegetation – a case study from the sandy soil–sediment sequence Rakt, the Netherlands
An insight into pre-Columbian raised fields: the case of San Borja, Bolivian lowlands
The impact of ancestral heath management on soils and landscapes: a reconstruction based on paleoecological analyses of soil records in the central and southeastern Netherlands
Soil archives of a Fluvisol: subsurface analysis and soil history of the medieval city centre of Vlaardingen, the Netherlands – an integral approach
Effect of grassland cutting frequency on soil carbon storage – a case study on public lawns in three Swedish cities
Facing policy challenges with inter- and transdisciplinary soil research focused on the UN Sustainable Development Goals
The significance of soils and soil science towards realization of the United Nations Sustainable Development Goals
Case studies of soil in art
Effects of fresh and aged chars from pyrolysis and hydrothermal carbonization on nutrient sorption in agricultural soils
Soil properties and pre-Columbian settlement patterns in the Monumental Mounds Region of the Llanos de Moxos, Bolivian Amazon
An ecosystem approach to assess soil quality in organically and conventionally managed farms in Iceland and Austria
Jungyu Choi, Roy van Beek, Elizabeth L. Chamberlain, Tony Reimann, Harm Smeenge, Annika van Oorschot, and Jakob Wallinga
SOIL, 10, 567–586, https://doi.org/10.5194/soil-10-567-2024, https://doi.org/10.5194/soil-10-567-2024, 2024
Short summary
Short summary
This research applies luminescence dating methods to a plaggic anthrosol in the eastern Netherlands to understand the formation history of the soil. To achieve this, we combined both quartz and feldspar luminescence dating methods. We developed a new method for feldspar to largely avoid the problem occurring from poorly bleached grains by examining two different signals from a single grain. Through our research, we were able to reconstruct the timing and processes of plaggic anthrosol formation.
Maximiliano González-Sosa, Carlos A. Sierra, J. Andrés Quincke, Walter E. Baethgen, Susan Trumbore, and M. Virginia Pravia
SOIL, 10, 467–486, https://doi.org/10.5194/soil-10-467-2024, https://doi.org/10.5194/soil-10-467-2024, 2024
Short summary
Short summary
Based on an approach that involved soil organic carbon (SOC) monitoring, radiocarbon measurement in bulk soil, and incubations from a long-term 60-year experiment, it was concluded that the avoidance of old carbon losses in the integrated crop–pasture systems is the main reason that explains their greater carbon storage capacities compared to continuous cropping. A better understanding of these processes is essential for making agronomic decisions to increase the carbon sequestration capacity.
Maria Regina Gmach, Martin Anders Bolinder, Lorenzo Menichetti, Thomas Kätterer, Heide Spiegel, Olle Åkesson, Jürgen Kurt Friedel, Andreas Surböck, Agnes Schweinzer, and Taru Sandén
SOIL, 10, 407–423, https://doi.org/10.5194/soil-10-407-2024, https://doi.org/10.5194/soil-10-407-2024, 2024
Short summary
Short summary
We evaluated the effect of soil management practices on decomposition at 29 sites (13 in Sweden and 16 in Austria) using long-term field experiments with the Tea Bag Index (TBI) approach. We found that the decomposition rate (k) and stabilization factor (S) were mainly governed by climatic conditions. In general, organic and mineral fertilization increased k and S, and reduced tillage increased S. Edaphic factors also affected k and S.
Esko Karvinen, Leif Backman, Leena Järvi, and Liisa Kulmala
SOIL, 10, 381–406, https://doi.org/10.5194/soil-10-381-2024, https://doi.org/10.5194/soil-10-381-2024, 2024
Short summary
Short summary
We measured and modelled soil respiration, a key part of the biogenic carbon cycle, in different urban green space types to assess its dynamics in urban areas. We discovered surprisingly similar soil respiration across the green space types despite differences in some of its drivers and that irrigation of green spaces notably elevates soil respiration. Our results encourage further research on the topic and especially on the role of irrigation in controlling urban soil respiration.
Claude Raoul Müller, Johan Six, Liesa Brosens, Philipp Baumann, Jean Paolo Gomes Minella, Gerard Govers, and Marijn Van de Broek
SOIL, 10, 349–365, https://doi.org/10.5194/soil-10-349-2024, https://doi.org/10.5194/soil-10-349-2024, 2024
Short summary
Short summary
Subsoils in the tropics are not as extensively studied as those in temperate regions. In this study, the conversion of forest to agriculture in a subtropical region affected the concentration of stabilized organic carbon (OC) down to 90 cm depth, while no significant differences between 90 cm and 300 cm were detected. Our results suggest that subsoils below 90 cm are unlikely to accumulate additional stabilized OC through reforestation over decadal periods due to declining OC input with depth.
Fernando Leceta, Christoph Binder, Christian Mader, Bertil Mächtle, Erik Marsh, Laura Dietrich, Markus Reindel, Bernhard Eitel, and Julia Meister
EGUsphere, https://doi.org/10.5194/egusphere-2024-637, https://doi.org/10.5194/egusphere-2024-637, 2024
Short summary
Short summary
This study explores prehispanic terrace agriculture in the southern Peruvian Andes, focusing on soil development and agricultural impacts. It examines soil types and properties, as well as agricultural practices, and traces the region's agricultural development over four phases, highlighting the resilience of ancient communities. The abandonment of terraces wasn't due to soil degradation, emphasizing the sustainability of prehispanic practices and the adaptation to environmental change.
Armwell Shumba, Regis Chikowo, Christian Thierfelder, Marc Corbeels, Johan Six, and Rémi Cardinael
SOIL, 10, 151–165, https://doi.org/10.5194/soil-10-151-2024, https://doi.org/10.5194/soil-10-151-2024, 2024
Short summary
Short summary
Conservation agriculture (CA), combining reduced or no tillage, permanent soil cover, and improved rotations, is often promoted as a climate-smart practice. However, our knowledge of the impact of CA on top- and subsoil soil organic carbon (SOC) stocks in the low-input cropping systems of sub-Saharan Africa is rather limited. Using two long-term experimental sites with different soil types, we found that mulch could increase top SOC stocks, but no tillage alone had a slightly negative impact.
Frédéric Marie Vanwindekens and Brieuc François Hardy
SOIL, 9, 573–591, https://doi.org/10.5194/soil-9-573-2023, https://doi.org/10.5194/soil-9-573-2023, 2023
Short summary
Short summary
Structural stability is critical for sustainable agricultural soil management. We invented a simple test to measure soil structural stability. The QuantiSlakeTest consists of a dynamic weighting of a dried soil sample in water. The test is rapid, does not require expensive equipment and provides a high density of information on soil structural properties. With an open-access programme for data management under development, the test has strong potential for adoption by a large community of users.
Moritz Laub, Marc Corbeels, Antoine Couëdel, Samuel Mathu Ndungu, Monicah Wanjiku Mucheru-Muna, Daniel Mugendi, Magdalena Necpalova, Wycliffe Waswa, Marijn Van de Broek, Bernard Vanlauwe, and Johan Six
SOIL, 9, 301–323, https://doi.org/10.5194/soil-9-301-2023, https://doi.org/10.5194/soil-9-301-2023, 2023
Short summary
Short summary
In sub-Saharan Africa, long-term low-input maize cropping threatens soil fertility. We studied how different quality organic inputs combined with mineral N fertilizer could counteract this. Farmyard manure was the best input to counteract soil carbon loss; mineral N fertilizer had no effect on carbon. Yet, the rates needed to offset soil carbon losses are unrealistic for farmers (>10 t of dry matter per hectare and year). Additional agronomic measures may be needed.
Chelsea K. Janke and Michael J. Bell
SOIL, 9, 243–259, https://doi.org/10.5194/soil-9-243-2023, https://doi.org/10.5194/soil-9-243-2023, 2023
Short summary
Short summary
Fertilizer blends of controlled release and stabilized nitrogen (N) demonstrated temporal N dynamics intermediate of unblended fertilizers. Soil characteristics had a significant impact on N dynamics and the efficacy of the differing enhanced efficiency fertilizer mechanisms to minimize potential N losses. Insights can improve N supply predictability, offering opportunities to improve N use efficiency in cropping systems.
Sara Niaz, J. Bernhard Wehr, Ram C. Dalal, Peter M. Kopittke, and Neal W. Menzies
SOIL, 9, 141–154, https://doi.org/10.5194/soil-9-141-2023, https://doi.org/10.5194/soil-9-141-2023, 2023
Short summary
Short summary
Sodic soils affect ~580 Mha in semi-arid and arid regions of the world. These soils have a weak structure. This laboratory study evaluated treatments to overcome the weak aggregate structure in two sodic Vertisols by applying organic amendments, gypsum, and wetting–drying cycles. We conclude that sodic soils need to be treated with gypsum to flocculate clay and organic amendments (lucerne or chicken manure) to form aggregates, whereas drying cycles aid in small macroaggregates formation.
Julia Fohrafellner, Sophie Zechmeister-Boltenstern, Rajasekaran Murugan, and Elena Valkama
SOIL, 9, 117–140, https://doi.org/10.5194/soil-9-117-2023, https://doi.org/10.5194/soil-9-117-2023, 2023
Short summary
Short summary
The number of meta-analyses in agriculture and soil sciences is continuously rising, but they are often of poor quality. We quantitatively analyzed the quality of 31 meta-analyses studying the effects of different management practices on soil organic carbon (SOC). We found that only one meta-analysis on no tillage/reduced tillage obtained a high score. New or improved meta-analyses on the effects of organic agriculture, biochar, fertilization, and crop diversification on SOC are urgently needed.
Shuiqing Chen, Jusheng Gao, Huaihai Chen, Zeyuan Zhang, Jing Huang, Lefu Lv, Jinfang Tan, and Xiaoqian Jiang
SOIL, 9, 101–116, https://doi.org/10.5194/soil-9-101-2023, https://doi.org/10.5194/soil-9-101-2023, 2023
Short summary
Short summary
Long-term inorganic P (IP) fertilization increased total P (TP), available P (AP) and IP, but manure fertilization accelerated the accumulation of organic P (OP). Long-term mineral fertilization had a negative impact on bacterial communities, while manure fertilization and rhizosphere soil provided more nutrients that improved the separation of bacterial communities. Correspondingly, P indicators such as IP and TP were related to the variation in a phosphate-solubilizing bacterial community.
Johan Bouma
SOIL, 8, 751–759, https://doi.org/10.5194/soil-8-751-2022, https://doi.org/10.5194/soil-8-751-2022, 2022
Short summary
Short summary
In the new
Soil Deal for Europe, land users, mostly farmers, and scientists are required to work jointly in
living labsto develop sustainable land use systems. We propose that threshold values for different ecosystem services in line with the UN Sustainable Development Goals (SDGs) and the EU Green Deal (GD) have to be met to define
lighthousesthat demonstrate successful sustainable land use systems, functioning as inspiring examples. A case study illustrates the important role of soils.
Frederick Büks and Martin Kaupenjohann
SOIL, 8, 373–380, https://doi.org/10.5194/soil-8-373-2022, https://doi.org/10.5194/soil-8-373-2022, 2022
Short summary
Short summary
The adverse effect of microplastic (MP) on soil biota and soil structure depends on MP particle size and surface characteristics. Since weathering plays a major role in the genesis of these, it must be considered in both the analysis of environmental MP and the production of artificial MP for laboratory experiments. This work integrates recent findings on adverse effects and the genesis of its surface characteristics and discusses how to reproduce them to obtain closer-to-nature designer MP.
Felice Sartori, Ilaria Piccoli, Riccardo Polese, and Antonio Berti
SOIL, 8, 213–222, https://doi.org/10.5194/soil-8-213-2022, https://doi.org/10.5194/soil-8-213-2022, 2022
Short summary
Short summary
This study aimed to evaluate the short-term effects of the transition from conventional to conservation agriculture on soil physical properties, by determining the best soil tillage and covering combination, to exploit the benefits of conservation agriculture from the first conversion years. The results proved that, despite an increase in bulk density and penetration resistance, soil under reduced tillage systems with a cover crop improved its hydraulic properties.
Virginie Sellier, Oldrich Navratil, John Patrick Laceby, Cédric Legout, Anthony Foucher, Michel Allenbach, Irène Lefèvre, and Olivier Evrard
SOIL, 7, 743–766, https://doi.org/10.5194/soil-7-743-2021, https://doi.org/10.5194/soil-7-743-2021, 2021
Short summary
Short summary
Open-cast mining increases soil erosion and transfer of sediment in river systems. Providing a methodology to better understand the sediment dynamic of these catchments is essential to manage this pollution. In this study, different tracers such as elemental geochemistry or colour properties were tested to trace and quantify the mining source contributions to the sediment inputs in the Thio River catchment, one of the first areas exploited for nickel mining in New Caledonia (i.e. since 1880).
Roisin O'Riordan, Jess Davies, Carly Stevens, and John N. Quinton
SOIL, 7, 661–675, https://doi.org/10.5194/soil-7-661-2021, https://doi.org/10.5194/soil-7-661-2021, 2021
Short summary
Short summary
As urban populations grow, soil sealing with impermeable surfaces will increase. At present there is limited knowledge on the effect of sealing on soil carbon and nutrients. We found that, in general, sealing reduced soil carbon and nutrients; however, where there were additions due to human activity, soil carbon and nutrients were increased. This suggests that there is a legacy soil carbon store in areas with an industrial past and highlights the influence of artefacts in urban soil.
Bartosz Bartkowski, Stephan Bartke, Nina Hagemann, Bernd Hansjürgens, and Christoph Schröter-Schlaack
SOIL, 7, 495–509, https://doi.org/10.5194/soil-7-495-2021, https://doi.org/10.5194/soil-7-495-2021, 2021
Short summary
Short summary
We use a holistic framework to analyze how agricultural policy in Germany affects the sustainability of soil management. We look at the adequacy of policy targets, objects (i.e. drivers of soil degradation), instruments, assumptions about farmers' behaviour, and the coherence among these four dimensions. We find deficits in each dimension, particularly object and instrument adequacy. Agricultural soil policy in Germany lacks depth and coherence, and the role of biomass demand is neglected.
Sascha Scherer, Benjamin Höpfer, Katleen Deckers, Elske Fischer, Markus Fuchs, Ellen Kandeler, Jutta Lechterbeck, Eva Lehndorff, Johanna Lomax, Sven Marhan, Elena Marinova, Julia Meister, Christian Poll, Humay Rahimova, Manfred Rösch, Kristen Wroth, Julia Zastrow, Thomas Knopf, Thomas Scholten, and Peter Kühn
SOIL, 7, 269–304, https://doi.org/10.5194/soil-7-269-2021, https://doi.org/10.5194/soil-7-269-2021, 2021
Short summary
Short summary
This paper aims to reconstruct Middle Bronze Age (MBA) land use practices in the northwestern Alpine foreland (SW Germany, Hegau). We used a multi-proxy approach including biogeochemical proxies from colluvial deposits in the surroundings of a MBA settlement, on-site archaeobotanical and zooarchaeological data and off-site pollen data. From our data we infer land use practices such as plowing, cereal growth, forest farming and use of fire that marked the beginning of major colluvial deposition.
Collin J. Weber, Alexander Santowski, and Peter Chifflard
SOIL, 7, 15–31, https://doi.org/10.5194/soil-7-15-2021, https://doi.org/10.5194/soil-7-15-2021, 2021
Short summary
Short summary
Pavement joints, defined as the joint between paving stones and filled with different materials, in the inner city area of Marburg (Hesse, Germany) show moderate to high pollution with different heavy metals. Enrichment of heavy metals in pavement joints is related to surface run-off accumulation. As the pollution of pavement joints poses direct risks to the environment and humans in urban areas, the inconspicuous joints should be considered in urban water management strategies.
Frederick Büks and Martin Kaupenjohann
SOIL, 6, 649–662, https://doi.org/10.5194/soil-6-649-2020, https://doi.org/10.5194/soil-6-649-2020, 2020
Short summary
Short summary
Laboratory experiments that assess microplastic (MP) impact on the terrestrial environment require information on common soil MP concentrations. We reviewed item numbers and mass concentrations recorded in 23 studies, with 223 sampling sites in total with respect to the underlying entry pathways, land uses and vicinities. Common values included amounts of up to 13 000 items kg−1 and 4.5 mg kg−1 dry soil. Based on the collected data, we identified problems in past field studies.
Maha Deeb, Peter M. Groffman, Manuel Blouin, Sara Perl Egendorf, Alan Vergnes, Viacheslav Vasenev, Donna L. Cao, Daniel Walsh, Tatiana Morin, and Geoffroy Séré
SOIL, 6, 413–434, https://doi.org/10.5194/soil-6-413-2020, https://doi.org/10.5194/soil-6-413-2020, 2020
Short summary
Short summary
The goal of this study was to discuss current methods to create soils adapted for various green infrastructure (GI) designs. Investigating these new soils for several design categories of GI will provide technical information for management and design agencies. Moreover, these studies can serve as pioneer experiments to prevent recurring errors and, thus, provide improved plant growth practices. Results show that these constructed soils have a high potential to provide multiple soil functions.
Katja Wiedner and Steven Polifka
SOIL, 6, 315–324, https://doi.org/10.5194/soil-6-315-2020, https://doi.org/10.5194/soil-6-315-2020, 2020
Short summary
Short summary
Microplastics and microglass are used in a wide range of everyday and industrial applications acting as abrasives, filler and binding agents, which could enter aquatic and terrestrial environments with unexpected consequences for ecosystems. Our study suggests that different types of microparticles seem to have contrary effects on soil microorganisms, depending on the origin and properties of microparticles. This study should be seen as basis for further research, which is urgently needed.
Nicolette Tamara Regina Johanna Maria Jonkman, Esmee Daniëlle Kooijman, Karsten Kalbitz, Nicky Rosa Maria Pouw, and Boris Jansen
SOIL, 5, 303–313, https://doi.org/10.5194/soil-5-303-2019, https://doi.org/10.5194/soil-5-303-2019, 2019
Short summary
Short summary
In the urban gardens of Kisumu we interviewed female farmers to determine the sources and scope of their agricultural knowledge. We assessed the impact of the knowledge by comparing the influence of two types of management on soil nutrients. While one type of management was more effective in terms of preserving soil nutrients, the other management type had socioeconomic benefits. Both environmental and socioeconomic effects have to be considered in agricultural training to increase their impact.
Matthew T. Streeter and Keith E. Schilling
SOIL, 4, 93–100, https://doi.org/10.5194/soil-4-93-2018, https://doi.org/10.5194/soil-4-93-2018, 2018
Short summary
Short summary
Iowa golf courses provide an ideal location to evaluate whether golf course management is affecting the quality of soils at depth. Our study evaluated how soil properties relating to soil health and resiliency varied with depth at golf courses across Iowa and interpreted relationships of these properties to current golf course management and inherent soil properties. Systematic variation in soil properties including sand content, NO3, and SOM was observed with depth.
Brice Prudat, Lena Bloemertz, and Nikolaus J. Kuhn
SOIL, 4, 47–62, https://doi.org/10.5194/soil-4-47-2018, https://doi.org/10.5194/soil-4-47-2018, 2018
Short summary
Short summary
Soil degradation is a major threat for farmers of semi-arid north-central Namibia. Having tools to assess soil quality is important to evaluate soil conditions and helps targeting important issues. We developed a soil evaluation toolbox that integrates farmers' field experiences and technical knowledge. The combination of local soil descriptions, field soil texture evaluation and soil colour provides locally meaningful information that reveals soil quality improvement potentials.
Johan Bouma
SOIL, 3, 153–159, https://doi.org/10.5194/soil-3-153-2017, https://doi.org/10.5194/soil-3-153-2017, 2017
Short summary
Short summary
Alexander von Humboldt was an inspiring scientist in the early 1800s, traveling widely, making many measurements, and linking different scientific disciplines while keeping an eye open to the needs of society. This is particularly relevant today in our information society, and researchers in developing countries are advised to follow the von Humboldt example when planning their future research.
Martina I. Gocke, Fabian Kessler, Jan M. van Mourik, Boris Jansen, and Guido L. B. Wiesenberg
SOIL, 2, 537–549, https://doi.org/10.5194/soil-2-537-2016, https://doi.org/10.5194/soil-2-537-2016, 2016
Short summary
Short summary
Investigation of a Dutch sandy profile demonstrated that buried soils provide beneficial growth conditions for plant roots in terms of nutrients. The intense exploitation of deep parts of the soil profile, including subsoil and soil parent material, by roots of the modern vegetation is often underestimated by traditional approaches. Potential consequences of deep rooting for terrestrial carbon stocks, located to a relevant part in buried soils, remain largely unknown and require further studies.
Leonor Rodrigues, Umberto Lombardo, Mareike Trauerstein, Perrine Huber, Sandra Mohr, and Heinz Veit
SOIL, 2, 367–389, https://doi.org/10.5194/soil-2-367-2016, https://doi.org/10.5194/soil-2-367-2016, 2016
Short summary
Short summary
Our study examines pre-Columbian agricultural raised fields in the Bolivian Amazon.
It provides a new interpretation for pre-Columbian management of raised fields.
The results show that differences in field size and height are the result of an adaptation to a site where soil properties vary significantly on a scale of tens to hundreds of meters. The analysis and dating of the raised fields sediments point towards an extensive and rather brief use of the raised fields, for about 100–200 years.
Marieke Doorenbosch and Jan M. van Mourik
SOIL, 2, 311–324, https://doi.org/10.5194/soil-2-311-2016, https://doi.org/10.5194/soil-2-311-2016, 2016
Short summary
Short summary
Soil records provide information about 5 millennia of heath management in cultural landscapes on sandy soils. Deforestations and the introduction of the deep, stable economy in the 18th century resulted in sand drifting and heath degradation. After the introduction of chemical fertilizers more than 90 % of the heaths were transformed into productive arable field or forests. Currently the last heaths are preserved as part of the cultural heritage.
Sjoerd Kluiving, Tim de Ridder, Marcel van Dasselaar, Stan Roozen, and Maarten Prins
SOIL, 2, 271–285, https://doi.org/10.5194/soil-2-271-2016, https://doi.org/10.5194/soil-2-271-2016, 2016
Short summary
Short summary
In medieval times the city of Vlaardingen (the Netherlands) was strategically located on the confluence of three rivers, the Maas, the Merwede, and the Vlaarding. Combined research on the history and soil of this city was initiated by an archaeological research question, following Dutch legislation. The start of fluvial system 2 in AD 600 correlates with evidence of the church that was present at least in AD 726/727. Results record the period before and after the flooding in AD 1170.
C. Poeplau, H. Marstorp, K. Thored, and T. Kätterer
SOIL, 2, 175–184, https://doi.org/10.5194/soil-2-175-2016, https://doi.org/10.5194/soil-2-175-2016, 2016
Short summary
Short summary
We compared two long-term contrasting systems of urban lawn management (frequently cut utility lawn vs. seldomly cut meadow-like lawn) regarding their effect on soil carbon in three Swedish cities. Biomass production was also measured during 1 year. The utility lawns had a significantly higher biomass production, which resulted in a higher soil carbon storage, since clippings were not removed. Soil carbon sequestration outweighed the higher management-related CO2 emissions of the utility lawns.
Johan Bouma and Luca Montanarella
SOIL, 2, 135–145, https://doi.org/10.5194/soil-2-135-2016, https://doi.org/10.5194/soil-2-135-2016, 2016
Short summary
Short summary
The recently accepted UN Sustainable Development Goals (SDGs) provide a major challenge to the research community, including soil science. SDGs require a interdisciplinary research approach that forces every discipline to critically evaluate its core messages. Effective communication with the policy arena requires use of common policy concepts such as policy phases and distinction of drivers, pressures, and responses to change. To accomodate such needs, research practices will have to change.
Saskia D. Keesstra, Johan Bouma, Jakob Wallinga, Pablo Tittonell, Pete Smith, Artemi Cerdà, Luca Montanarella, John N. Quinton, Yakov Pachepsky, Wim H. van der Putten, Richard D. Bardgett, Simon Moolenaar, Gerben Mol, Boris Jansen, and Louise O. Fresco
SOIL, 2, 111–128, https://doi.org/10.5194/soil-2-111-2016, https://doi.org/10.5194/soil-2-111-2016, 2016
Short summary
Short summary
Soil science, as a land-related discipline, has links to several of the UN Sustainable Development Goals which are demonstrated through the functions of soils and related ecosystem services. We discuss how soil scientists can rise to the challenge both internally and externally in terms of our relations with colleagues in other disciplines, diverse groups of stakeholders and the policy arena. To meet these goals we recommend the set of steps to be taken by the soil science community as a whole.
C. Feller, E. R. Landa, A. Toland, and G. Wessolek
SOIL, 1, 543–559, https://doi.org/10.5194/soil-1-543-2015, https://doi.org/10.5194/soil-1-543-2015, 2015
Short summary
Short summary
Case studies of artworks focused on painting, installation, and film are presented, with the view of encouraging further exploration of art about, in, and with soil, as a contribution to raising soil awareness.
M. Gronwald, A. Don, B. Tiemeyer, and M. Helfrich
SOIL, 1, 475–489, https://doi.org/10.5194/soil-1-475-2015, https://doi.org/10.5194/soil-1-475-2015, 2015
U. Lombardo, S. Denier, and H. Veit
SOIL, 1, 65–81, https://doi.org/10.5194/soil-1-65-2015, https://doi.org/10.5194/soil-1-65-2015, 2015
Short summary
Short summary
In the present paper we explore to what degree soil properties might have influenced pre-Columbian settlement patterns in the Monumental Mounds Region (MMR) of the Llanos de Moxos (LM), Bolivian Amazon. This study provides new data on the soil properties of the south-eastern Bolivian Amazon and reinforces the hypothesis that environmental constraints and opportunities exerted an important role on pre-Columbian occupation patterns and the population density reached in the Bolivian Amazon.
J. P. van Leeuwen, T. Lehtinen, G. J. Lair, J. Bloem, L. Hemerik, K. V. Ragnarsdóttir, G. Gísladóttir, J. S. Newton, and P. C. de Ruiter
SOIL, 1, 83–101, https://doi.org/10.5194/soil-1-83-2015, https://doi.org/10.5194/soil-1-83-2015, 2015
Cited articles
Abarenkov, K., Zirk, A., Piirmann, T., Pöhönen, R., Ivanov, F.,
Nilsson, R. H., and Kõljalg, U.: UNITE general FASTA release
for Fungi, UNITE Community [data set], https://doi.org/10.15156/BIO/1280049, 2021.
Arbizu, P. M.: pairwiseAdonis: Pairwise Multilevel Comparison using Adonis, GitHub repository [code], https://github.com/pmartinezarbizu/pairwiseAdonis.git, 2017.
Bai, R., Wang, J.-T., Deng, Y., He, J.-Z., Feng, K., and Zhang, L.-M.:
Microbial Community and Functional Structure Significantly Varied among
Distinct Types of Paddy Soils But Responded Differently along Gradients of
Soil Depth Layers, Front Microbiol., 8, 945, https://doi.org/10.3389/fmicb.2017.00945, 2017.
Balesdent, J., Basile-Doelsch, I., Chadoeuf, J., Cornu, S., Derrien, D.,
Fekiacova, Z., and Hatté, C.: Atmosphere–soil carbon transfer as a
function of soil depth, Nature, 559, 599–602, https://doi.org/10.1038/s41586-018-0328-3,
2018.
Barberán, A., Ramirez, K. S., Leff, J. W., Bradford, M. A., Wall, D. H.,
and Fierer, N.: Why are some microbes more ubiquitous than others?
Predicting the habitat breadth of soil bacteria, Ecol. Lett., 17,
794–802, https://doi.org/10.1111/ele.12282, 2014.
Batjes, N. H.: Total carbon and nitrogen in the soils of the world, Europ.
J. Soil Sci., 47, 151–163, 1996.
Beets, P. and Brownlie, R.: Puruki experimental catchment: site, climate,
forest management, and research, New Zeal. J. For. Sci.,
17, 137–160, 1987.
Beets, P. N. and Beets, J. M.: Soil water storage changes in a small
headwater catchment in the central North Island of New Zealand following
afforestation with Pinus radiata, Forest Ecol. Manag., 462, 117967,
https://doi.org/10.1016/j.foreco.2020.117967, 2020.
Beets, P., Oliver, G., and Clinton, P.: Soil carbon protection in
podocarp/hardwood forest, and effects of conversion to pasture and exotic
pine forest, Environ. Pollut., 116, 63–73,
https://doi.org/10.1016/S0269-7491(01)00248-2, 2002.
Beets, P. N., Oliver, G. R., Kimberley, M. O., Pearce, S. H., and Rodgers, B.: Genetic and soil factors associated with variation in visual magnesium deficiency symptoms in Pinus radiata, Forest Ecol. Manag., 189, 263–279, https://doi.org/10.1016/j.foreco.2003.08.013, 2004.
Blakemore, L. C., Searle, P. L., and Daly, B. K.: Methods for chemical
analysis of soils, Department of Scientific and Industrial Research, New
Zealand, https://doi.org/10.7931/DL1-SBSR-10A, 1977.
Blume, E., Bischoff, M., Reichert, J., Moorman, T., Konopka, A., and Turco,
R.: Surface and subsurface microbial biomass, community structure and
metabolic activity as a function of soil depth and season, Appl. Soil
Ecol., 20, 171–181, 2002.
Bokulich, N. A. and Mills, D. A.: Improved Selection of Internal Transcribed
Spacer-Specific Primers Enables Quantitative, Ultra-High-Throughput
Profiling of Fungal Communities, Appl. Environ. Microbiol., 79,
2519–2526, https://doi.org/10.1128/AEM.03870-12, 2013.
Bonfante, P. and Venice, F.: Mucoromycota: going to the roots of
plant-interacting fungi, Fungal Biol. Rev., 34, 100–113,
https://doi.org/10.1016/j.fbr.2019.12.003, 2020.
Bray, R. H. and Kurtz, L. T.: Determination of total, organic, and available
forms of phosphorus in soils, Soil Sci., 59, 39–46, https://doi.org/10.1097/00010694-194501000-00006, 1945.
Brewer, T. E., Aronson, E. L., Arogyaswamy, K., Billings, S. A., Botthoff,
J. K., Campbell, A. N., Dove, N. C., Fairbanks, D., Gallery, R. E., Hart, S.
C., Kaye, J., King, G., Logan, G., Lohse, K. A., Maltz, M. R., Mayorga, E.,
O'Neill, C., Owens, S. M., Packman, A., Pett-Ridge, J., Plante, A. F.,
Richter, D. D., Silver, W. L., Yang, W. H., and Fierer, N.: Ecological and
Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil
Horizons, mBio, 10, e01318–01319, https://doi.org/10.1128/mBio.01318-19, 2019.
Brownlie, R. and Kelliher, F.: Puruki Forest climate: Measurement techniques, database, preliminary analyses, FRI bulletin No. 147,
Scion, ISSN 0111-8129, 1989.
Callahan, B. J., McMurdie, P. J., Rosen, M. J., Han, A. W., Johnson, A. J.
A., and Holmes, S. P.: DADA2: High-resolution sample inference from Illumina
amplicon data, Nat. Method., 13, 581–583, https://doi.org/10.1038/nmeth.3869, 2016.
Caporaso, J. G., Lauber, C. L., Walters, W. A., Berg-Lyons, D., Huntley, J.,
Fierer, N., Owens, S. M., Betley, J., Fraser, L., and Bauer, M.:
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and
MiSeq platforms, ISME J., 6, 1621–1624, 2012.
Carteron, A., Beigas, M., Joly, S., Turner, B. L., and Laliberté, E.:
Temperate Forests Dominated by Arbuscular or Ectomycorrhizal Fungi Are
Characterized by Strong Shifts from Saprotrophic to Mycorrhizal Fungi with
Increasing Soil Depth, Microb. Ecol., 82, 377–390,
https://doi.org/10.1007/s00248-020-01540-7, 2021.
Caspi, R., Billington, R., Fulcher, C. A., Keseler, I. M., Kothari, A.,
Krummenacker, M., Latendresse, M., Midford, P. E., Ong, Q., Ong, W. K.,
Paley, S., Subhraveti, P., and Karp, P. D.: The MetaCyc database of
metabolic pathways and enzymes, Nucl. Acid. Res., 46, D633–D639,
https://doi.org/10.1093/nar/gkx935, 2018.
Chabbi, A., Kögel-Knabner, I., and Rumpel, C.: Stabilised carbon in
subsoil horizons is located in spatially distinct parts of the soil profile,
Soil Biol. Biochem., 41, 256–261, 2009.
Challacombe, J., Eichorst, S., Hauser, L., Land, M., Xie, G., and Kuske, C.:
Biological Consequences of Ancient Gene Acquisition and Duplication in the
Large Genome of Candidatus Solibacter usitatus Ellin6076, PLoS ONE, 6,
e24882, https://doi.org/10.1371/journal.pone.0024882, 2011.
Chu, H., Sun, H., Tripathi, B. M., Adams, J. M., Huang, R., Zhang, Y., and
Shi, Y.: Bacterial community dissimilarity between the surface and
subsurface soils equals horizontal differences over several kilometers in
the western Tibetan Plateau, Environ. Microbiol., 18, 1523–1533,
https://doi.org/10.1111/1462-2920.13236, 2016.
Csárdi, G. and Nepusz, T.: The igraph software package for complex
network research, InterJournal, Complex Systems, 1695 pp.,
https://igraph.org/, 2006.
Curd, E. E., Martiny, J. B., Li, H., and Smith, T. B.: Bacterial diversity
is positively correlated with soil heterogeneity, Ecosphere, 9, e02079, https://doi.org/10.1002/ecs2.2079,
2018.
DeBruyn, J. M., Nixon, L. T., Fawaz, M. N., Johnson, A. M., and Radosevich,
M.: Global Biogeography and Quantitative Seasonal Dynamics of
Gemmatimonadetes in Soil, Appl. Environ. Microbiol., 77,
6295–6300, https://doi.org/10.1128/AEM.05005-11, 2011.
Domeignoz-Horta, L. A., Shinfuku, M., Junier, P., Poirier, S., Verrecchia,
E., Sebag, D., and DeAngelis, K. M.: Direct evidence for the role of
microbial community composition in the formation of soil organic matter
composition and persistence, ISME Commun., 1, 64,
https://doi.org/10.1038/s43705-021-00071-7, 2021.
Douglas, G., Mackay, A., Vibart, R., Dodd, M., McIvor, I., and McKenzie, C.:
Soil carbon stocks under grazed pasture and pasture-tree systems, Sci. Total
Environ., 715, 136910, https://doi.org/10.1016/j.scitotenv.2020.136910, 2020.
Eilers, K. G., Debenport, S., Anderson, S., and Fierer, N.: Digging deeper
to find unique microbial communities: the strong effect of depth on the
structure of bacterial and archaeal communities in soil, Soil Biol.
Biochem., 50, 58–65, 2012.
Fang, C., Smith, P., Moncrieff, J. B., and Smith, J. U.: Similar response of
labile and resistant soil organic matter pools to changes in temperature,
Nature, 433, 57–59, 2005.
Feng, H., Guo, J., Wang, W., Song, X., and Yu, S.: Soil Depth Determines the
Composition and Diversity of Bacterial and Archaeal Communities in a Poplar
Plantation, Forests, 10, 550, https://doi.org/10.3390/f10070550, 2019.
Fierer, N., Allen, A. S., Schimel, J. P., and Holden, P. A.: Controls on
microbial CO2 production: a comparison of surface and subsurface soil
horizons, Glob. Change Biol., 9, 1322–1332,
https://doi.org/10.1046/j.1365-2486.2003.00663.x, 2003.
Frey, B., Walthert, L., Perez-Mon, C., Stierli, B., Köchli, R.,
Dharmarajah, A., and Brunner, I.: Deep Soil Layers of Drought-Exposed
Forests Harbor Poorly Known Bacterial and Fungal Communities, Front
Microbiol., 12, 674160, https://doi.org/10.3389/fmicb.2021.674160, 2021.
Froggatt, P. C.: Stratigraphy and nature of Taupo Pumice Formation, New
Zeal. J. Geol. Geophys., 24, 231–248,
https://doi.org/10.1080/00288306.1981.10422715, 1981.
Garrett, L. G., Wakelin, S. A., Pearce, S. H., Wakelin, S. J., and Barnard,
T.: Puruki Experimental Forest – half a century of forestry research, New
Zeal. J. Forest., 66, 3–10, 2021.
Garten, C. T., Hanson, P. J., Todd, D. E., Lu, B. B., Brice, D. J., Lajtha,
K., and Michener, R.: Natural 15N-and 13C-abundance as indicators of forest
nitrogen status and soil carbon dynamics, Stable Isotopes, Ecol.
Environ. Sci., 61, 61–82, 2008.
Garten, C. T.: Comparison of forest soil carbon dynamics at five sites along
a latitudinal gradient, Geoderma, 167/168, 30–40,
https://doi.org/10.1016/j.geoderma.2011.08.007, 2011.
Gattinger, A., Muller, A., Haeni, M., Skinner, C., Fliessbach, A., Buchmann,
N., Mäder, P., Stolze, M., Smith, P., Scialabba, N. E. H., and Niggli, U.:
Enhanced topsoil carbon stocks under organic farming, P.
Natl. Acad. Sci. USA, 109, 18226–18231,
2012.
Gonzalez, Y. N., Bacon, A. R., and Harris, W. G.: A Billion Tons of
Unaccounted for Carbon in the Southeastern United States, Geophys.
Res. Lett., 45, 7580–7587, https://doi.org/10.1029/2018GL077540, 2018.
Gross, C. D. and Harrison, R. B.: The Case for Digging Deeper: Soil Organic
Carbon Storage, Dynamics, and Controls in Our Changing World, Soil Syst.,
3, 28, https://doi.org/10.3390/soilsystems3020028, 2019.
Hansel, C. M., Fendorf, S., Jardine, P. M., and Francis, C. A.: Changes in
bacterial and archaeal community structure and functional diversity along a
geochemically variable soil profile, Appl. Environ. Microbiol.,
74, 1620–1633, 2008.
Hao, J., Chai, Y. N., Lopes, L. D., Ordóñez, R. A., Wright, E. E.,
Archontoulis, S., and Schachtman, D. P.: The Effects of Soil Depth on the
Structure of Microbial Communities in Agricultural Soils in Iowa (United
States), Appl. Environ. Microbiol., 87, e02673-20,
https://doi.org/10.1128/AEM.02673-20, 2021.
Hartmann, M., Lee, S., Hallam, S. J., and Mohn, W. W.: Bacterial, archaeal
and eukaryal community structures throughout soil horizons of harvested and
naturally disturbed forest stands, Environ. Microbiol., 11,
3045–3062, 2009.
Hewitt, A. E.: New Zealand soil classification, Landcare Research Science Series, No. 1, 3rd Edn., 136 pp., https://doi.org/10.7931/DL1-LRSS-1-2010, 2010.
Hoffmann, K., Voigt, K., and Kirk, P.: Mortierellomycotina subphyl. nov.,
based on multi-gene genealogies, Mycotaxon, 115, 353–363,
https://doi.org/10.5248/115.353, 2011.
Hoggard, M., Vesty, A., Wong, G., Montgomery, J. M., Fourie, C., Douglas, R.
G., Biswas, K., and Taylor, M. W.: Characterizing the Human Mycobiota: A
Comparison of Small Subunit rRNA, ITS1, ITS2, and Large Subunit rRNA Genomic
Targets, Front Microbiol., 9, 2208, https://doi.org/10.3389/fmicb.2018.02208, 2018.
Jandl, R., Lindner, M., Vesterdal, L., Bauwens, B., Baritz, R., Hagedorn,
F., Johnson, D. W., Minkkinen, K., and Byrne, K. A.: How strongly can forest
management influence soil carbon sequestration?, Geoderma, 137, 253–268,
https://doi.org/10.1016/j.geoderma.2006.09.003, 2007.
Jansson, J. K. and Hofmockel, K. S.: Soil microbiomes and climate change,
Nat. Rev. Microbiol., 18, 35–46, 2020.
Jastrow, J. D., Amonette, J. E., and Bailey, V. L.: Mechanisms controlling
soil carbon turnover and their potential application for enhancing carbon
sequestration, Climatic Change, 80, 5–23, https://doi.org/10.1007/s10584-006-9178-3,
2007.
Jobbágy, E. and Jackson, R.: The Vertical Distribution of Soil Organic
Carbon and Its Relation to Climate and Vegetation, Ecol. Appl.,
10, 423–436, https://doi.org/10.2307/2641104, 2000.
Jones, H. S., Garrett, L. G., Beets, P. N., Kimberley, M. O., and Oliver,
G. R.: Impacts of harvest residue management on soil carbon stocks in a
plantation forest, Soil Sci. Soc. Am. J., 72, 1621–1627,
https://doi.org/10.2136/sssaj2007.0333, 2008.
Koarashi, J., Hockaday, W. C., Masiello, C. A., and Trumbore, S. E.:
Dynamics of decadally cycling carbon in subsurface soils, J.
Geophys. Res.-Biogeo., 117, G03033, https://doi.org/10.1029/2012JG002034, 2012.
Kurtz, Z. D., Müller, C. L., Miraldi, E. R., Littman, D. R., Blaser, M.
J., and Bonneau, R. A.: Sparse and Compositionally Robust Inference of
Microbial Ecological Networks, PLOS Comput. Biol., 11, e1004226,
https://doi.org/10.1371/journal.pcbi.1004226, 2015.
Kuzyakov, Y. and Blagodatskaya, E.: Microbial hotspots and hot moments in
soil: Concept and review, Soil Biol. Biochem., 83, 184–199,
https://doi.org/10.1016/j.soilbio.2015.01.025, 2015.
Kuzyakov, Y.: Priming effects: Interactions between living and dead organic
matter, Soil Biol. Biochem., 42, 1363–1371,
https://doi.org/10.1016/j.soilbio.2010.04.003, 2010.
Lal, R.: Soil Carbon Sequestration Impacts on Global Climate Change and Food
Security, Science, 304, 1623–1627, https://doi.org/10.1126/science.1097396, 2004.
Li, X., Wang, H., Li, X., Li, X., and Zhang, H.: Distribution
characteristics of fungal communities with depth in paddy fields of three
soil types in China, J. Microbiol., 58, 279–287,
https://doi.org/10.1007/s12275-020-9409-8, 2020.
Likulunga, L. E., Rivera Pérez, C. A., Schneider, D., Daniel, R., and
Polle, A.: Tree species composition and soil properties in pure and mixed
beech-conifer stands drive soil fungal communities, Forest Ecol.
Manag., 502, 119709, https://doi.org/10.1016/j.foreco.2021.119709, 2021.
Lin, H. and Peddada, S. D.: Analysis of microbial compositions: a review of
normalization and differential abundance analysis, NPJ Biofilms
Microbiomes, 6, 60, https://doi.org/10.1038/s41522-020-00160-w, 2020.
Lladó, S., López-Mondéjar, R., and Baldrian, P.: Forest Soil
Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to
Global Change, Microbiol. Mol. Biol. R., 81, e00063-16,
https://doi.org/10.1128/MMBR.00063-16, 2017.
Mathieu, J. A., Hatté, C., Balesdent, J., and Parent, É.: Deep soil
carbon dynamics are driven more by soil type than by climate: a worldwide
meta-analysis of radiocarbon profiles, Glob. Change Biol., 21, 4278–4292,
2015.
McMurdie, P. J. and Holmes, S.: phyloseq: An R Package for Reproducible
Interactive Analysis and Graphics of Microbiome Census Data, Plos One, 8,
e61217, https://doi.org/10.1371/journal.pone.0061217, 2013.
Mukul, S. A., Halim, M. A., and Herbohn, J.: Forest carbon stock and fluxes:
distribution, biogeochemical cycles, and measurement techniques, Life on
Land, Encyclopedia of the UN Sustainable Development Goals; Leal Filho, edited by:
Azul, W., Brandli, A. M., Lange Salvia, L., Wall, A., T., Life on Land, Encyclopedia of the UN Sustainable Development Goals, Springer, 365–380, https://doi.org/10.1007/978-3-319-71065-5_23-1, 2020.
Mundra, S., Kjonaas, O. J., Morgado, L. N., Krabberod, A. K., Ransedokken,
Y., and Kauserud, H.: Soil depth matters: shift in composition and
inter-kingdom co-occurrence patterns of microorganisms in forest soils, FEMS
Microbiol. Ecol., 97, fiab022, https://doi.org/10.1093/femsec/fiab022, 2021.
Ni, X., Liao, S., Tan, S., Peng, Y., Wang, D., Yue, K., Wu, F., and Yang,
Y.: The vertical distribution and control of microbial necromass carbon in
forest soils, Global Ecol. Biogeogr., 29, 1829–1839,
https://doi.org/10.1111/geb.13159, 2020.
Oksanen, J., Blanchet, F. G., Friendly, M., Kindt, R., Legendre, P., McGlinn, D., Minchin, P. R., O'Hara, R. B., Simpson, G. L., Solymos, P., and Stevens, M. H. H.: vegan: Community Ecology Package, R package version 2.5-6, 2019 [code], https://github.com/vegandevs/vegan, 2020.
Oliver, G., Beets, P., Garrett, L., Pearce, S. H., Kimberley, M.,
Ford-Robertson, J. B., and Robertson, K.: Variation in soil carbon in pine
plantations and implications for monitoring soil carbon stocks in relation
to land-use change and forest site management in New Zealand, Forest Ecol.
Manag., 203, 283–295, https://doi.org/10.1016/j.foreco.2004.07.045, 2004.
Paul, A., Balesdent, J., and Hatté, C.: 13C-14C relations reveal that
soil 13C-depth gradient is linked to historical changes in vegetation 13C,
Plant Soil, 447, 305–317, https://doi.org/10.1007/s11104-019-04384-4, 2020.
Poage, M. A. and Feng, X.: A theoretical analysis of steady state δ13C profiles of soil organic matter, Global Biogeochem. Cy., 18, GB2016,
https://doi.org/10.1029/2003GB002195, 2004.
Rayment, G. E. and Lyons, D. J.: Soil chemical methods: Australasia, Vol. 3, CSIRO Publishing, ISBN 9780643101364, 2011.
Revelle, W.: psych: Procedures for Personality and Psychological Research, R package version 2.2.9, Northwestern University [code], https://CRAN.R-project.org/package=psych,
2021.
Rijkse, W. C. and Bell, J.: Soils of Purukohukohu IHD Experimental Basin,
Rotorua County, North Island, New Zealand, NZ soil survey report, Department of Scientific and Industrial Research, https://doi.org/10.7931/DL1-SSR-18,
1974.
Rosling, A., Landeweert, R., Lindahl, B. D., Larsson, K. H., Kuyper, T. W.,
Taylor, A. F. S., and Finlay, R. D.: Vertical distribution of
ectomycorrhizal fungal taxa in a podzol soil profile, New Phytol., 159,
775–783, https://doi.org/10.1046/j.1469-8137.2003.00829.x, 2003.
Ross, C. W., Grunwald, S., Vogel, J. G., Markewitz, D., Jokela, E. J.,
Martin, T. A., Bracho, R., Bacon, A. R., Brungard, C. W., and Xiong, X.:
Accounting for two-billion tons of stabilized soil carbon, Sci. Total
Environ., 703, 134615, https://doi.org/10.1016/j.scitotenv.2019.134615, 2020.
Russel, J.: Russel88/MicEco: v0.9.15 (v0.9.15), Zenodo [code],
https://doi.org/10.5281/zenodo.4733747, 2021.
Schmidt, M. W. I., Torn, M. S., Abiven, S., Dittmar, T., Guggenberger, G.,
Janssens, I. A., Kleber, M., Kögel-Knabner, I., Lehmann, J., Manning, D.
A. C., Nannipieri, P., Rasse, D. P., Weiner, S., and Trumbore, S. E.:
Persistence of soil organic matter as an ecosystem property, Nature, 478,
49–56, https://doi.org/10.1038/nature10386, 2011.
Seuradge, B. J., Oelbermann, M., and Neufeld, J. D.: Depth-dependent
influence of different land-use systems on bacterial biogeography, FEMS
Microbiol. Ecol., 93, fiw239, https://doi.org/10.1093/femsec/fiw239, 2016.
Shahsavari, E., Aburto-Medina, A., Taha, M., and Ball, A. S.: A quantitative
PCR approach for quantification of functional genes involved in the
degradation of polycyclic aromatic hydrocarbons in contaminated soils,
MethodsX, 3, 205–211, https://doi.org/10.1016/j.mex.2016.02.005, 2016.
Shannon, P., Markiel, A., Ozier, O., Baliga, N. S., Wang, J. T., Ramage, D.,
Amin, N., Schwikowski, B., and Ideker, T.: Cytoscape: a software environment
for integrated models of biomolecular interaction networks, Genome Res., 13,
2498–2504, https://doi.org/10.1101/gr.1239303, 2003.
Silver, W. L., Neff, J., McGroddy, M., Veldkamp, E., Keller, M., and Cosme,
R.: Effects of Soil Texture on Belowground Carbon and Nutrient Storage in a
Lowland Amazonian Forest Ecosystem, Ecosystems, 3, 193–209,
https://doi.org/10.1007/s100210000019, 2000.
Six, J., Callewaert, P., Lenders, S., De Gryze, S., Morris, S., Gregorich,
E., Paul, E., and Paustian, K.: Measuring and understanding carbon storage
in afforested soils by physical fractionation, Soil Sci. Soc.
Am. J., 66, 1981–1987, 2002.
Song, W., Tong, X., Liu, Y., and Li, W.: Microbial Community, Newly
Sequestered Soil Organic Carbon, and δ15N Variations Driven by Tree
Roots, Front Microbiol., 11, 314, https://doi.org/10.3389/fmicb.2020.00314, 2020.
Sparks, D. L., Page, A. L., Helmke, P. A., Loeppert, R. H., Soltanpour,
P. N., Tabatabai, M. A., Johnston, C. T., and Sumner, M.
E.: Methods of Soil Analysis, Part 3 – Chemical Methods, Soil Science Society of America, 551–574, https://doi.org/10.2136/sssabookser5.3, 1996.
Spohn, M., Klaus, K., Wanek, W., and Richter, A.: Microbial carbon use
efficiency and biomass turnover times depending on soil depth –
Implications for carbon cycling, Soil Biol. Biochem., 96, 74–81,
https://doi.org/10.1016/j.soilbio.2016.01.016, 2016.
Stuiver, M. and Polach, H. A.: Discussion Reporting of 14C Data,
Radiocarbon, 19, 355–363, https://doi.org/10.1017/S0033822200003672, 1977.
Štursová, M., Bárta, J., Šantrůčková, H., and
Baldrian, P.: Small-scale spatial heterogeneity of ecosystem properties,
microbial community composition and microbial activities in a temperate
mountain forest soil, FEMS Microbiol. Ecol., 92, fiw185,
https://doi.org/10.1093/femsec/fiw185, 2016.
Taylor, M.: Determination of total phosphorus in soil using simple Kjeldahl
digestion, Commun. Soil Sci. Plant Anal., 31, 2665–2670,
2000.
Telles, E. de C. C., de Camargo, P. B., Martinelli, L. A., Trumbore, S. E.,
da Costa, E. S., Santos, J., Higuchi, N., and Oliveira Jr., R. C.: Influence
of soil texture on carbon dynamics and storage potential in tropical forest
soils of Amazonia, Global Biogeochem. Cy., 17, 1040, https://doi.org/10.1029/2002GB001953, 2003.
Torn, M. S., Trumbore, S. E., Chadwick, O. A., Vitousek, P. M., and
Hendricks, D. M.: Mineral control of soil organic carbon storage and
turnover, Nature, 389, 170–173, https://doi.org/10.1038/38260, 1997.
Turner, S., Mikutta, R., Meyer-Stüve, S., Guggenberger, G.,
Schaarschmidt, F., Lazar, C. S., Dohrmann, R., and Schippers, A.: Microbial
Community Dynamics in Soil Depth Profiles Over 120,000 Years of Ecosystem
Development, Front Microbiol., 8, 874, https://doi.org/10.3389/fmicb.2017.00874, 2017.
Urbanová, M., Šnajdr, J., and Baldrian, P.: Composition of fungal
and bacterial communities in forest litter and soil is largely determined by
dominant trees, Soil Biol. Biochem., 84, 53–64,
https://doi.org/10.1016/j.soilbio.2015.02.011, 2015.
Valentine, D. L.: Adaptations to energy stress dictate the ecology and
evolution of the Archaea, Nat. Rev. Microbiol., 5, 316–323,
https://doi.org/10.1038/nrmicro1619, 2007.
Vogel, J., Nelson, D., and Southon, J.: 14C Background Levels in An Accelerator Mass Spectrometry System, Radiocarbon, 29, 323–333, https://doi.org/10.1017/S0033822200043733, 1987.
Wagner, L., Stielow, B., Hoffmann, K., Petkovits, T., Papp, T.,
Vágvölgyi, C., De Hoog, G., Verkley, G., and Voigt, K.: A
comprehensive molecular phylogeny of the Mortierellales
(Mortierellomycotina) based on nuclear ribosomal DNA, Persoonia-Molecular
Phylogeny and Evolution of Fungi, 30, 77–93, 2013.
Wang, C., Houlton, B. Z., Liu, D., Hou, J., Cheng, W., and Bai, E.: Stable
isotopic constraints on global soil organic carbon turnover, Biogeosciences,
15, 987–995, https://doi.org/10.5194/bg-15-987-2018, 2018.
Wang, Q., Garrity, G. M., Tiedje, J. M., and Cole, J. R.: Naive Bayesian
classifier for rapid assignment of rRNA sequences into the new bacterial
taxonomy, Appl. Environ. Microbiol., 73, 5261–5267, 2007.
Will, G. and Stone, E.: Pumice soils as a medium for tree growth. 1.
Moisture storage capacity, New Zeal. J. Forest., 12, 189–199,
1967.
Wynn, J. G., Bird, M. I., and Wong, V. N.: Rayleigh distillation and the
depth profile of 13C 12C ratios of soil organic carbon from soils of
disparate texture in Iron Range National Park, Far North Queensland,
Australia, Geochim. Cosmochim. Ac., 69, 1961–1973, 2005.
Yang, Y., Li, T., Wang, Y., Cheng, H., Chang, S. X., Liang, C., and An, S.:
Negative effects of multiple global change factors on soil microbial
diversity, Soil Biol. Biochem., 156, 108229,
https://doi.org/10.1016/j.soilbio.2021.108229, 2021.
Yost, J. L. and Hartemink, A. E.: How deep is the soil studied – an
analysis of four soil science journals, Plant Soil, 452, 5–18,
https://doi.org/10.1007/s11104-020-04550-z, 2020.
Yu, G., Smith, D. K., Zhu, H., Guan, Y., and Lam, T. T.-Y.: ggtree: an r
package for visualization and annotation of phylogenetic trees with their
covariates and other associated data, Method. Ecol. Evol., 8,
28–36, https://doi.org/10.1111/2041-210X.12628, 2017.
Yurkov, A. M., Wehde, T., Federici, J., Schäfer, A. M., Ebinghaus, M.,
Lotze-Engelhard, S., Mittelbach, M., Prior, R., Richter, C., Röhl, O.,
and Begerow, D.: Yeast diversity and species recovery rates from beech
forest soils, Mycol. Prog., 15, 845–859,
https://doi.org/10.1007/s11557-016-1206-8, 2016.
Zhang, C., Tayyab, M., Abubakar, A. Y., Yang, Z., Pang, Z., Islam, W., Lin,
Z., Li, S., Luo, J., Fan, X., Fallah, N., and Zhang, H.: Bacteria with
Different Assemblages in the Soil Profile Drive the Diverse Nutrient Cycles
in the Sugarcane Straw Retention Ecosystem, Diversity, 11, 194, https://doi.org/10.3390/d11100194, 2019.
Short summary
Forest soils store large amounts of carbon (C), but research has remained focused on C storage in topsoil layers. We investigated changes in forest soil C storage and microbial ecology to 1 m depth. Though absolute soil C content, microbial diversity and microbial biomass declined sharply with depth, 35 % of total soil C was cumulatively stored in subsoil layers. Our findings highlight the importance of including subsoils when calculating the C storage capacity of forest systems.
Forest soils store large amounts of carbon (C), but research has remained focused on C storage...