Articles | Volume 6, issue 1
https://doi.org/10.5194/soil-6-163-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/soil-6-163-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Soil environment grouping system based on spectral, climate, and terrain data: a quantitative branch of soil series
Andre Carnieletto Dotto
Department of Soil Science, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, SP, 13418-900, Brazil
Jose A. M. Demattê
CORRESPONDING AUTHOR
Department of Soil Science, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, SP, 13418-900, Brazil
Raphael A. Viscarra Rossel
School of Molecular and Life Sciences, Curtin University, Perth, WA 6102, Australia
Rodnei Rizzo
Department of Soil Science, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, SP, 13418-900, Brazil
Related authors
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Thorsten Behrens, Karsten Schmidt, Felix Stumpf, Simon Tutsch, Marie Hertzog, Urs Grob, Armin Keller, and Raphael Viscarra Rossel
EGUsphere, https://doi.org/10.5194/egusphere-2024-2810, https://doi.org/10.5194/egusphere-2024-2810, 2024
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We integrate various methods to create soil property maps for soil surveyors, which they can utilize as a reference before beginning their fieldwork. A new sampling design based on a geographical stratification is proposed focussing on local feature space variability. It allows for a systematic analysis of predictive accuracy for varying densities. The spectral and spatial models yielded high accuracies. Our study highlights the value of integrating pedometric technologies in soil surveys.
Lingfei Wang, Gab Abramowitz, Ying-Ping Wang, Andy Pitman, and Raphael A. Viscarra Rossel
SOIL, 10, 619–636, https://doi.org/10.5194/soil-10-619-2024, https://doi.org/10.5194/soil-10-619-2024, 2024
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Effective management of soil organic carbon (SOC) requires accurate knowledge of its distribution and factors influencing its dynamics. We identify the importance of variables in spatial SOC variation and estimate SOC stocks in Australia using various models. We find there are significant disparities in SOC estimates when different models are used, highlighting the need for a critical re-evaluation of land management strategies that rely on the SOC distribution derived from a single approach.
Danilo César de Mello, Clara Glória Oliveira Baldi, Cássio Marques Moquedace, Isabelle de Angeli Oliveira, Gustavo Vieira Veloso, Lucas Carvalho Gomes, Márcio Rocha Francelino, Carlos Ernesto Gonçalves Reynaud Schaefer, Elpídio Inácio Fernandes-Filho, Edgar Batista de Medeiros Júnior, Fabio Soares de Oliveira, José João Lelis Leal de Souza Souza, Tiago Ferreira, and José A. M. Demattê
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2024-2, https://doi.org/10.5194/gmd-2024-2, 2024
Preprint under review for GMD
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The study explores Maritime Antarctica's geology, shaped by periglacial forces, using pioneering gamma-spectrometric and magnetic surveys on igneous rocks due to limited Antarctic surveys. Machine learning predicts radionuclide and magnetic content based on terrain features, linking their distribution to landscape processes, morphometrics, lithology, and pedogeomorphology. Inaccuracies arise due to complex periglacial processes and landscape complexities.
Lewis Walden, Farid Sepanta, and Raphael Viscarra Rossel
EGUsphere, https://doi.org/10.5194/egusphere-2023-2464, https://doi.org/10.5194/egusphere-2023-2464, 2023
Preprint archived
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We characterised the chemical and mineral composition of soil organic carbon fractions with mid-infrared spectroscopy. We identified unique and shared features of the spectra of carbon fractions, and the interactions between their organic and mineral components. These interactions are key to the persistence of C in soils, and we propose that mid-infrared spectroscopy could help to infer stability of soil C.
Zefang Shen, Haylee D'Agui, Lewis Walden, Mingxi Zhang, Tsoek Man Yiu, Kingsley Dixon, Paul Nevill, Adam Cross, Mohana Matangulu, Yang Hu, and Raphael A. Viscarra Rossel
SOIL, 8, 467–486, https://doi.org/10.5194/soil-8-467-2022, https://doi.org/10.5194/soil-8-467-2022, 2022
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We compared miniaturised visible and near-infrared spectrometers to a portable visible–near-infrared instrument, which is more expensive. Statistical and machine learning algorithms were used to model 29 key soil health indicators. Accuracy of the miniaturised spectrometers was comparable to the portable system. Soil spectroscopy with these tiny sensors is cost-effective and could diagnose soil health, help monitor soil rehabilitation, and deliver positive environmental and economic outcomes.
Danilo César de Mello, Tiago Osório Ferreira, Gustavo Vieira Veloso, Marcos Guedes de Lana, Fellipe Alcantara de Oliveira Mello, Luis Augusto Di Loreto Di Raimo, Diego Ribeiro Oquendo Cabrero, José João Lelis Leal de Souza, Elpídio Inácio Fernandes-Filho, Márcio Rocha Francelino, Carlos Ernesto Gonçalves Reynaud Schaefer, and José A. M. Demattê
SOIL Discuss., https://doi.org/10.5194/soil-2022-17, https://doi.org/10.5194/soil-2022-17, 2022
Revised manuscript not accepted
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We proposed a different method to evaluate different intensities of weathering in a heterogeneous area (soils, geology and relief) and small number of samples. We use combined data from three geophysical sensors, clustering and machine learning (nested-leave-one-out-cross-validation) to distinguish weathering intensities and assess the relationship of these variables with weathering, relief, geology, and soil types and attributes. and we obtained satisfactory performances of models evaluation.
Yuanyuan Yang, Zefang Shen, Andrew Bissett, and Raphael A. Viscarra Rossel
SOIL, 8, 223–235, https://doi.org/10.5194/soil-8-223-2022, https://doi.org/10.5194/soil-8-223-2022, 2022
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We present a new method to estimate the relative abundance of the dominant phyla and diversity of fungi in Australian soil. It uses state-of-the-art machine learning with publicly available data on soil and environmental proxies for edaphic, climatic, biotic and topographic factors, and visible–near infrared wavelengths. The estimates could serve to supplement the more expensive molecular approaches towards a better understanding of soil fungal abundance and diversity in agronomy and ecology.
Danilo César de Mello, Gustavo Vieira Veloso, Marcos Guedes de Lana, Fellipe Alcantara de Oliveira Mello, Raul Roberto Poppiel, Diego Ribeiro Oquendo Cabrero, Luis Augusto Di Loreto Di Raimo, Carlos Ernesto Gonçalves Reynaud Schaefer, Elpídio Inácio Fernandes Filho, Emilson Pereira Leite, and José Alexandre Melo Demattê
Geosci. Model Dev., 15, 1219–1246, https://doi.org/10.5194/gmd-15-1219-2022, https://doi.org/10.5194/gmd-15-1219-2022, 2022
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We used soil parent material, terrain attributes, and geophysical data from the soil surface to test and compare different and unprecedented geophysical sensor combination, as well as different machine learning algorithms to model and predict several soil attributes. Also, we analyzed the importance of pedoenvironmental variables. The soil attributes were modeled throughout different machine learning algorithms and related to different geophysical sensor combinations.
Juhwan Lee, Raphael A. Viscarra Rossel, Mingxi Zhang, Zhongkui Luo, and Ying-Ping Wang
Biogeosciences, 18, 5185–5202, https://doi.org/10.5194/bg-18-5185-2021, https://doi.org/10.5194/bg-18-5185-2021, 2021
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We performed Roth C simulations across Australia and assessed the response of soil carbon to changing inputs and future climate change using a consistent modelling framework. Site-specific initialisation of the C pools with measurements of the C fractions is essential for accurate simulations of soil organic C stocks and composition at a large scale. With further warming, Australian soils will become more vulnerable to C loss: natural environments > native grazing > cropping > modified grazing.
Philipp Baumann, Anatol Helfenstein, Andreas Gubler, Armin Keller, Reto Giulio Meuli, Daniel Wächter, Juhwan Lee, Raphael Viscarra Rossel, and Johan Six
SOIL, 7, 525–546, https://doi.org/10.5194/soil-7-525-2021, https://doi.org/10.5194/soil-7-525-2021, 2021
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We developed the Swiss mid-infrared spectral library and a statistical model collection across 4374 soil samples with reference measurements of 16 properties. Our library incorporates soil from 1094 grid locations and 71 long-term monitoring sites. This work confirms once again that nationwide spectral libraries with diverse soils can reliably feed information to a fast chemical diagnosis. Our data-driven reduction of the library has the potential to accurately monitor carbon at the plot scale.
Anatol Helfenstein, Philipp Baumann, Raphael Viscarra Rossel, Andreas Gubler, Stefan Oechslin, and Johan Six
SOIL, 7, 193–215, https://doi.org/10.5194/soil-7-193-2021, https://doi.org/10.5194/soil-7-193-2021, 2021
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In this study, we show that a soil spectral library (SSL) can be used to predict soil carbon at new and very different locations. The importance of this finding is that it requires less time-consuming lab work than calibrating a new model for every local application, while still remaining similar to or more accurate than local models. Furthermore, we show that this method even works for predicting (drained) peat soils, using a SSL with mostly mineral soils containing much less soil carbon.
Zhongkui Luo, Raphael A. Viscarra-Rossel, and Tian Qian
Biogeosciences, 18, 2063–2073, https://doi.org/10.5194/bg-18-2063-2021, https://doi.org/10.5194/bg-18-2063-2021, 2021
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Using the data from 141 584 whole-soil profiles across the globe, we disentangled the relative importance of biotic, climatic and edaphic variables in controlling global SOC stocks. The results suggested that soil properties and climate contributed similarly to the explained global variance of SOC in four sequential soil layers down to 2 m. However, the most important individual controls are consistently soil-related, challenging current climate-driven framework of SOC dynamics.
Wartini Ng, Budiman Minasny, Wanderson de Sousa Mendes, and José Alexandre Melo Demattê
SOIL, 6, 565–578, https://doi.org/10.5194/soil-6-565-2020, https://doi.org/10.5194/soil-6-565-2020, 2020
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The number of samples utilised to create predictive models affected model performance. This research compares the number of samples needed by a deep learning model to outperform the traditional machine learning models using visible near-infrared spectroscopy data for soil properties predictions. The deep learning model was found to outperform machine learning models when the sample size was above 2000.
Juhwan Lee, Gina M. Garland, and Raphael A. Viscarra Rossel
SOIL, 4, 213–224, https://doi.org/10.5194/soil-4-213-2018, https://doi.org/10.5194/soil-4-213-2018, 2018
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Soil nitrogen (N) is an essential element for plant growth, but its plant-available forms are subject to loss from the environment by leaching and gaseous emissions. Still, factors controlling soil mineral N concentrations at large spatial scales are not well understood. We determined and discussed primary soil controls over the concentrations of NH4+ and NO3− at the continental scale of Australia while considering specific dominant land use patterns on a regional basis.
Jacqueline R. England and Raphael A. Viscarra Rossel
SOIL, 4, 101–122, https://doi.org/10.5194/soil-4-101-2018, https://doi.org/10.5194/soil-4-101-2018, 2018
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Proximal sensing can be used for soil C accounting, but the methods need to be standardized and procedural guidelines developed to ensure proficient measurement and accurate reporting. This is particularly important if there are financial incentives for landholders to adopt practices to sequester C. We review sensing for C accounting and discuss the requirements for the development of new soil C accounting methods based on sensing, including requirements for reporting, auditing and verification.
V. Haverd, M. R. Raupach, P. R. Briggs, J. G. Canadell, P. Isaac, C. Pickett-Heaps, S. H. Roxburgh, E. van Gorsel, R. A. Viscarra Rossel, and Z. Wang
Biogeosciences, 10, 2011–2040, https://doi.org/10.5194/bg-10-2011-2013, https://doi.org/10.5194/bg-10-2011-2013, 2013
Related subject area
Soil systems
Evolutionary pathways in soil-landscape evolution models
Effects of environmental factors on the influence of tillage conversion on saturated soil hydraulic conductivity obtained with different methodologies: a global meta-analysis
Assessing soil and land health across two landscapes in eastern Rwanda to inform restoration activities
Nonlinear turnover rates of soil carbon following cultivation of native grasslands and subsequent afforestation of croplands
The effect of soil properties on zinc lability and solubility in soils of Ethiopia – an isotopic dilution study
Comparison of regolith physical and chemical characteristics with geophysical data along a climate and ecological gradient, Chilean Coastal Cordillera (26 to 38° S)
Obtaining more benefits from crop residues as soil amendments by application as chemically heterogeneous mixtures
Modeling soil and landscape evolution – the effect of rainfall and land-use change on soil and landscape patterns
Spatially resolved soil solution chemistry in a central European atmospherically polluted high-elevation catchment
On-farm study reveals positive relationship between gas transport capacity and organic carbon content in arable soil
Soil bacterial community and functional shifts in response to altered snowpack in moist acidic tundra of northern Alaska
Potential for agricultural production on disturbed soils mined for apatite using legumes and beneficial microbe
Zero net livelihood degradation – the quest for a multidimensional protocol to combat desertification
Soil microbial communities following bush removal in a Namibian savanna
Effects of land use changes on the dynamics of selected soil properties in northeast Wellega, Ethiopia
Soil biochemical properties in brown and gray mine soils with and without hydroseeding
Quantifying soil and critical zone variability in a forested catchment through digital soil mapping
W. Marijn van der Meij
SOIL, 8, 381–389, https://doi.org/10.5194/soil-8-381-2022, https://doi.org/10.5194/soil-8-381-2022, 2022
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The development of soils and landscapes can be complex due to changes in climate and land use. Computer models are required to simulate this complex development. This research presents a new method to analyze and visualize the results of these models. This is done with the use of evolutionary pathways (EPs), which describe how soil properties change in space and through time. I illustrate the EPs with examples from the field and give recommendations for further use of EPs in soil model studies.
Kaihua Liao, Juan Feng, Xiaoming Lai, and Qing Zhu
SOIL, 8, 309–317, https://doi.org/10.5194/soil-8-309-2022, https://doi.org/10.5194/soil-8-309-2022, 2022
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The influence of the conversion from conventional tillage (CT) to conservation tillage (CS; including no tillage, NT, and reduced tillage, RT) on the saturated hydraulic conductivity (Ksat) of soils is not well understood and still debated. This study has demonstrated that quantifying the effects of tillage conversion on soil Ksat needed to consider experimental conditions, especially the measurement technique and conversion period.
Leigh Ann Winowiecki, Aida Bargués-Tobella, Athanase Mukuralinda, Providence Mujawamariya, Elisée Bahati Ntawuhiganayo, Alex Billy Mugayi, Susan Chomba, and Tor-Gunnar Vågen
SOIL, 7, 767–783, https://doi.org/10.5194/soil-7-767-2021, https://doi.org/10.5194/soil-7-767-2021, 2021
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Achieving global restoration targets requires scaling of context-specific restoration options on the ground. We implemented the Land Degradation Surveillance Framework in Rwanda to assess indicators of soil and land health, including soil organic carbon (SOC), erosion prevalence, infiltration capacity, and tree biodiversity. Maps of soil erosion and SOC were produced at 30 m resolution with high accuracy. These data provide a rigorous biophysical baseline for tracking changes over time.
Guillermo Hernandez-Ramirez, Thomas J. Sauer, Yury G. Chendev, and Alexander N. Gennadiev
SOIL, 7, 415–431, https://doi.org/10.5194/soil-7-415-2021, https://doi.org/10.5194/soil-7-415-2021, 2021
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We evaluated how sequestration of soil carbon changes over the long term after converting native grasslands into croplands and also from annual cropping into trees. Soil carbon was reduced by cropping but increased with tree planting. This decrease in carbon storage with annual cropping happened over centuries, while trees increase soil carbon over just a few decades. Growing trees in long-term croplands emerged as a climate-change-mitigating action, effective even within a person’s lifetime.
Abdul-Wahab Mossa, Dawd Gashu, Martin R. Broadley, Sarah J. Dunham, Steve P. McGrath, Elizabeth H. Bailey, and Scott D. Young
SOIL, 7, 255–268, https://doi.org/10.5194/soil-7-255-2021, https://doi.org/10.5194/soil-7-255-2021, 2021
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Zinc deficiency is a widespread nutritional problem in human populations, especially in sub-Saharan Africa (SSA). Crop Zn depends in part on soil Zn. The Zn status of soils from the Amahara region, Ethiopia, was quantified by measuring pseudo-total, available, soluble and isotopically exchangeable Zn, and soil geochemical properties were assessed. Widespread phyto-available Zn deficiency was observed. The results could be used to improve agronomic interventions to tackle Zn deficiency in SSA.
Mirjam Schaller, Igor Dal Bo, Todd A. Ehlers, Anja Klotzsche, Reinhard Drews, Juan Pablo Fuentes Espoz, and Jan van der Kruk
SOIL, 6, 629–647, https://doi.org/10.5194/soil-6-629-2020, https://doi.org/10.5194/soil-6-629-2020, 2020
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In this study geophysical observations from ground-penetrating radar with pedolith physical and geochemical properties from pedons excavated in four study areas of the climate and ecological gradient in the Chilean Coastal Cordillera are combined. Findings suggest that profiles with ground-penetrating radar along hillslopes can be used to infer lateral thickness variations in pedolith horizons and to some degree physical and chemical variations with depth.
Marijke Struijk, Andrew P. Whitmore, Simon R. Mortimer, and Tom Sizmur
SOIL, 6, 467–481, https://doi.org/10.5194/soil-6-467-2020, https://doi.org/10.5194/soil-6-467-2020, 2020
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Crop residues are widely available on-farm resources containing carbon and nutrients, but, as soil amendments, their decomposition does not always benefit the soil. We applied mixtures of crop residues that are chemically different from each other and found significantly increased soil organic matter and available nitrogen levels. Applying crop residue mixtures has practical implications involving the removal, mixing and reapplication rather than simply returning crop residues to soils in situ.
W. Marijn van der Meij, Arnaud J. A. M. Temme, Jakob Wallinga, and Michael Sommer
SOIL, 6, 337–358, https://doi.org/10.5194/soil-6-337-2020, https://doi.org/10.5194/soil-6-337-2020, 2020
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We developed a model to simulate long-term development of soils and landscapes under varying rainfall and land-use conditions to quantify the temporal variation of soil patterns. In natural landscapes, rainfall amount was the dominant factor influencing soil variation, while for agricultural landscapes, landscape position became the dominant factor due to tillage erosion. Our model shows potential for simulating past and future developments of soils in various landscapes and climates.
Daniel A. Petrash, Frantisek Buzek, Martin Novak, Bohuslava Cejkova, Pavel Kram, Tomas Chuman, Jan Curik, Frantisek Veselovsky, Marketa Stepanova, Oldrich Myska, Pavla Holeckova, and Leona Bohdalkova
SOIL, 5, 205–221, https://doi.org/10.5194/soil-5-205-2019, https://doi.org/10.5194/soil-5-205-2019, 2019
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Some 30 years after peak pollution-related soil acidification occurred in central Europe, the forest ecosystem of a small V-shaped mountain valley, UDL, was still out of chemical balance relative to the concurrent loads of anions and cations in precipitation. The spatial variability in soil solution chemistry provided evidence pointing to substrate variability, C and P bioavailability, and landscape as major controls on base metal leaching toward the subsoil level in N-saturated catchments.
Tino Colombi, Florian Walder, Lucie Büchi, Marlies Sommer, Kexing Liu, Johan Six, Marcel G. A. van der Heijden, Raphaël Charles, and Thomas Keller
SOIL, 5, 91–105, https://doi.org/10.5194/soil-5-91-2019, https://doi.org/10.5194/soil-5-91-2019, 2019
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The role of soil aeration in carbon sequestration in arable soils has only been explored little, especially at the farm level. The current study, which was conducted on 30 fields that belong to individual farms, reveals a positive relationship between soil gas transport capability and soil organic carbon content. We therefore conclude that soil aeration needs to be accounted for when developing strategies for carbon sequestration in arable soil.
Michael P. Ricketts, Rachel S. Poretsky, Jeffrey M. Welker, and Miquel A. Gonzalez-Meler
SOIL, 2, 459–474, https://doi.org/10.5194/soil-2-459-2016, https://doi.org/10.5194/soil-2-459-2016, 2016
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Soil microbial communities play a key role in the cycling of carbon (C) in Arctic tundra ecosystems through decomposition of organic matter (OM). Climate change predictions include increased temperature and snow accumulation, resulting in altered plant communities and soil conditions. To determine how soil bacteria may respond, we sequenced soil DNA from a long-term snow depth treatment gradient in Alaska. Results indicate that bacteria produce less OM-degrading enzymes under deeper snowpack.
Rebecca Swift, Liza Parkinson, Thomas Edwards, Regina Carr, Jen McComb, Graham W. O'Hara, Giles E. St. John Hardy, Lambert Bräu, and John Howieson
SOIL Discuss., https://doi.org/10.5194/soil-2016-33, https://doi.org/10.5194/soil-2016-33, 2016
Preprint retracted
Marcos H. Easdale
SOIL, 2, 129–134, https://doi.org/10.5194/soil-2-129-2016, https://doi.org/10.5194/soil-2-129-2016, 2016
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Zero Net Land Degradation (ZNLD) was proposed as a new global protocol to combat desertification. This framework aims at reducing the rate of global land degradation and increasing the rate of restoration of already degraded land. However, there is a narrow focus on land and soil, while an essential human dimension to the sustainability of drylands is lacking and should be more adequately tackled. I propose a complementary perspective based on the sustainable livelihood approach.
Jeffrey S. Buyer, Anne Schmidt-Küntzel, Matti Nghikembua, Jude E. Maul, and Laurie Marker
SOIL, 2, 101–110, https://doi.org/10.5194/soil-2-101-2016, https://doi.org/10.5194/soil-2-101-2016, 2016
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Savannas represent most of the world’s livestock grazing land and are suffering worldwide from bush encroachment and desertification. We studied soil under bush and grass in a bush-encroached savanna in Namibia. With bush removal, there were significant changes in soil chemistry and microbial community structure, but these changes gradually diminished with time. Our results indicate that the ecosystem can substantially recover over a time period of approximately 10 years following bush removal.
Alemayehu Adugna and Assefa Abegaz
SOIL, 2, 63–70, https://doi.org/10.5194/soil-2-63-2016, https://doi.org/10.5194/soil-2-63-2016, 2016
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The purpose of our study was to explore the effects of land use changes on the dynamics of soil properties and their implications for land degradation. The result indicates that cultivated land has a lower organic matter, total nitrogen, cation exchange capacity, pH, and exchangeable Ca2+ and Mg2+ contents than forestland and grazing land.
C. Thomas, A. Sexstone, and J. Skousen
SOIL, 1, 621–629, https://doi.org/10.5194/soil-1-621-2015, https://doi.org/10.5194/soil-1-621-2015, 2015
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Surface coal mining disrupts large areas of land and eliminates valuable hardwood forests. Restoring the land to a sustainable forest ecosystem with suitable soils is the goal of reclamation. Soil microbial activity is an indicator of restoration success. We found hydroseeding with herbaceous forage species and fertilization doubled tree growth and microbial biomass carbon (an indicator of microbial activity) compared to non-hydroseed areas. Hydroseeding is an important component of reclamation.
M. Holleran, M. Levi, and C. Rasmussen
SOIL, 1, 47–64, https://doi.org/10.5194/soil-1-47-2015, https://doi.org/10.5194/soil-1-47-2015, 2015
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Short summary
The objective of this study was to develop a soil grouping system based on spectral, climate, and terrain variables with the aim of developing a quantitative way to classify soils. To derive the new system, we applied the above-mentioned variables using cluster analysis and defined eight groups or "soil environment groupings" (SEGs). The SEG system facilitated the identification of groups with similar characteristics using not only soil but also environmental variables for their distinction.
The objective of this study was to develop a soil grouping system based on spectral, climate,...