Articles | Volume 11, issue 1
https://doi.org/10.5194/soil-11-105-2025
https://doi.org/10.5194/soil-11-105-2025
Original research article
 | 
30 Jan 2025
Original research article |  | 30 Jan 2025

Soil organic carbon mineralization is controlled by the application dose of exogenous organic matter

Orly Mendoza, Stefaan De Neve, Heleen Deroo, Haichao Li, Astrid Françoys, and Steven Sleutel
Abstract

Substantial input of exogenous organic matter (EOM) may be required to offset the projected decline in soil organic carbon (SOC) stocks in croplands caused by global warming. However, information on the effectivity of the EOM application dose in preserving SOC stocks is surprisingly limited. Therefore, we set up a 90 d incubation experiment with large soil volumes (sandy loam and silt loam) to compare the mineralization of EOM (13C-labelled ryegrass) and SOC as a function of three EOM application doses (0.5, 1.5, and 5 g dry matter kg−1 soil). The percentage of mineralized EOM was expected to increase linearly with a higher EOM dose in sandy loam soil and to level off in silt loam soil due to the limited O2 supply in order to maintain aerobic microbial activity. In the sandy loam soil, the percentage of mineralized EOM was not affected by EOM dose, while SOC mineralization increased proportionally with an increasing EOM dose (+49.6 mg C g−1 EOM). Likewise, the formation of microbial biomass carbon was proportional to EOM dose, suggesting no reduction in microbial growth efficiency at a higher C concentration. In the silt loam soil, a decreasing tendency in the percentage of mineralized EOM was apparent but could not be confirmed statistically. We therefore conclude that, as in the sandy loam, the proportion of EOM mineralization was not affected with an increasing EOM dose, while SOC mineralization increased at a higher rate than in the sandy loam soil (+117.2 mg C g−1 EOM). Consistently with this lack of response in the proportion of EOM mineralization to EOM dose, soil EH did not decrease with an increasing EOM dose, indicating no O2 limitations. In both soils, an increasing EOM dose possibly supplied energy for microbial growth and enzyme production, which, in turn, stimulated mineralization of native SOC (i.e. co-metabolism). The observed stimulation of soil macroporosity at higher EOM doses in the silt loam soil might have contributed to sustaining the aerobic conditions required for SOC mineralization. In sum, this experiment and our previous research suggest that EOM mineralization is mostly independent of EOM dose, but EOM dose modulates the mineralization of native SOC. Provisional C balances compared to unamended controls indicated that, at low doses, less C remained than when EOM was added at normal or high doses in sandy loam soil, while no effect was found in silt loam soil. These findings tentatively indicate that using larger EOM doses could help preserve more added EOM-C, but longer-term confirmation in the field will firstly be required before we can draw any conclusion for soil C management.

1 Introduction

Small changes in global carbon (C) stocks can cause significant changes in climate (Smith et al., 2020). Croplands are a potential global C sink because of their lower soil organic carbon (SOC) content relative to that of the corresponding native ecosystems (Paustian et al., 1997). Zomer et al. (2017) estimated that croplands could potentially sequester 0.90–1.85 Gt C yr−1, representing a substantial portion (i.e. 26 %–53 %) of the “4 per 1000” initiative target (3.4 Gt C yr−1) that aims to offset most of the annual increase in atmospheric CO2 (15.8 Gt CO2 yr−1 or 4.3 Gt C yr−1) (Paustian et al., 2019). To preserve SOC stocks and soil fertility, most agricultural systems rely on the application of exogenous organic matter (EOM) to the soil, usually as crop residue or animal manure. Depending on its composition and dose, EOM contributes significantly to the overall soil C balance, which can be derived using soil C balance calculations or simulation model runs. In both empirical and more complex process-based SOC simulation models, EOM degradability is primarily determined by its quality; soil texture; and soil environmental parameters, such as temperature, moisture content, and availability of N (Kutsch, 2012). However, EOM dose (amount of C added per kg soil or per m2) supposedly has little or no impact on its mineralization rate or on the mineralization rate of SOC in SOC models. For example, the RothC model (Jenkinson et al., 2008; Powlson et al., 2013) and the AMG model (Andriulo et al., 1999) simulate an unrestricted response of C mineralization to C concentration. The DNDC model simulates several anaerobic processes via Michaelis–Menten kinetics (Li et al., 1997), i.e. with a feedback to exogenous organic carbon (EOC) dosage, but, again, the aerobic mineralization of C follows first-order kinetics.

Nevertheless, several reasons have been provided for the feedback between EOM dose and its decomposition in soil. First, the fate of OM in soil can be controlled by its accessibility to decomposers (Dungait et al., 2012; Lehmann et al., 2020). Thus, larger soil EOM quantities may promote closer contact with decomposers and positive impacts on EOM and SOC mineralization. Don et al. (2013) demonstrated that total SOC was more readily mineralized when the added EOM (compost) was concentrated as opposed to when it was dispersed in soil. Kuzyakov and Domanski (2000) also argued that the local disproportional growth of microbial biomass and stimulation of its activity with EOM dose may have positive effects on EOM and SOC decomposition via co-metabolism or other SOC-priming mechanisms. However, negative SOC priming might also occur if, for instance, higher stimulated heterotrophic activity leads to local depletion of O2 during decomposition, slowing down further EOM mineralization. Second, stimulated microbial activity at higher EOM doses might indirectly modulate soil microbial activity by controlling soil structure development. De Gryze et al. (2005) reported that increasing the doses of wheat residue led to a proportional formation of soil aggregates. Furthermore, Shahbaz et al. (2017a) concluded that adding a higher dose of wheat residue (1.40 vs. 5.04 g dry matter kg−1) stimulated macroaggregate formation, resulting in positive priming of SOC in a silt loam soil. Using the same soil but higher wheat residue doses (5.4 and 10.8 vs. 1.40 and 5.04 g kg−1 soil), Shahbaz et al. (2017b) also reported that SOC priming was diminished at a high dose. Similarly, Mendoza et al. (2022a) observed that increasing EOM (ground maize straw and ryegrass) doses stimulated soil macroporosity but did not affect EOM mineralization. Such control of the soil structure and potential feedbacks to EOM and SOC mineralization can be soil specific. Increasing the application dose of 13C-labelled ryegrass promoted the formation of mesopores and macropores, and their volume percentages were positively correlated with the magnitude of positive SOC-priming effects in a sandy loam but not in a silt loam soil (Mendoza et al., 2022b). Finally, adding relatively N-poor EOM at a higher dosage can adversely impact its degradation due to the temporal shortage of mineral N in soil for microbial decomposers.

The conclusions of the above-mentioned studies, focusing on C mineralization in response to the application dose, were mostly based on simplified soil systems. Despite the diverse chemical complexity encountered in real conditions, laboratory experiments studying dosage effects on C mineralization are often limited by the use of single chemical compounds, such as glucose (Blagodatskaya et al., 2007; Liu et al., 2017; Schneckenberger et al., 2008). More complex plant-derived substrates were finely ground and mixed in soil, such as <2 mm wheat residue (Shahbaz et al., 2017a, b), ground maize straw particles (Mendoza et al., 2022a), and ±2 cm chopped pieces of ryegrass (Mendoza et al., 2022b). Such finer EOM sources likely decompose differently in laboratory than in field conditions because of the large surface area of the residue in contact with the soil (Garnier et al., 2008); on the other hand, a potentially stronger interaction with the soil mineral phase may protect OM from decomposition. Both phenomena, using single chemical compounds and their unrepresentative small size compared to more complex and larger-sized plant residue pieces in field conditions, may render the EOM dosage responses from laboratory incubations unrepresentative of OM degradation in the field. To better approach field conditions, incubation experiments would need to be upscaled with larger pieces of crop residue that could constitute C hotspots with a more locally confined but stronger impact on soil structure and biological soil processes. Moreover, at such C hotspots, oxygen shortages may impede aerobic soil C mineralization. Such responses have been largely overlooked when interpreting soil C mineralization data (Keiluweit et al., 2017), and soil structure should thus also be kept as intact as possible to account for those aspects.

To account for these shortcomings and to obtain a more realistic understanding of the application dose effect on EOM and SOC mineralization as it might occur in the field, we aimed to study the decomposition of large pieces of 13C-labelled ryegrass residue in large, relatively less disturbed soil cores. Consequently, as compared to Mendoza et al. (2022b) and Shahbaz et al. (2017a), the soil masses used in this newly designed soil incubation experiment were about 23 times and 70 times larger, the soils were only coarsely sieved (<10 mm), and the added crop residues were not chopped. The concentration of the ryegrass dose added to non-refined ryegrass pieces is expected to yield a stronger local impact on soil structure, and the concentration of C mineralization into such relative hotspots might more readily result in local depletion of O2, with potential negative impacts on EOM and SOC mineralization as compared to previous work on this topic. We hypothesized that the mineralized percentage of added EOM (further referred to as relative EOM mineralization) would increase with an increasing application dose due to the closer contact of EOM and decomposers. To gain insight into the potential indirect control of EOM dose over its mineralization via the mediation of soil aeration and structure, the effects of EOM dosage on soil redox potential and pore neck size distribution were assessed. The experiment was performed in both sandy loam and silt loam soils. We expected that, in finer-textured soil, O2 provision would more readily limit EOM mineralization at higher EOM doses because of slower gaseous diffusion compared to in coarser-textured soil. We also hypothesized that SOC mineralization would be stimulated as a larger EOM application dose would lead to SOC priming, which can be linked to the classical co-metabolism mechanism and to promoted soil aeration, likely through the enhancement of macroporosity. An overview of the hypotheses can be seen in Fig. 1.

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f01

Figure 1Expected outcomes and hypotheses of the EOM application dose effect on EOM and native SOC mineralization in sandy loam and silt loam soils. The figure illustrates an increase in microbial biomass carbon (MBC) and macroporosity with increasing EOM dose, without making assumptions between soil textures. Overall, we expect the proportion of EOM mineralization to increase with higher EOM doses in sandy loam soil due to the closer contact between EOM and microbes at higher doses. In silt loam soil, the proportion of EOM mineralization is expected to level off at higher dose due to a higher chance of limited O2 supply, which may restrict aerobic microbial activity compared to sandy loam soil. Priming of SOC mineralization is expected to increase with higher EOM doses, although no specific hypotheses regarding soil texture differences are proposed. This increase is attributed to the enhanced co-metabolism, where higher microbial activity – reflected by increased MBC – would promote SOC mineralization and the formation of macroporosity.

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2 Materials and methods

2.1 Soils and labelled 13C ryegrass used in the incubation experiments

A soil incubation experiment was set up with different EOM doses and soil textures to investigate their interactive effect on EOM-C mineralization. We selected two topsoils with contrasting soil textures, i.e. sandy loam and silt loam, but with similar SOC content, C : N ratio (10 and 9, respectively), and δ13C (Table 1). These soils were sampled at a depth of approximately 5 to 20 cm at the Institute for Agricultural Research in Melle, Belgium, and at a nearby farmer's field in Oosterzele, East Flanders, Belgium.

13C-pulse-labelled ryegrass was used as the model EOM for a reliable discrimination of EOM and SOC mineralization based on 13/12C-resolved soil CO2 efflux measurements. 13C pulse labelling was performed at the Ghent University experimental farm in Bottelare, Belgium, by weekly exposure of initially pruned ryegrass (Lolium perenne L.) to a temporarily 13CO2-enriched atmosphere for a period of 2 months inside Plexiglas labelling chambers. These 13CO2 flushes were obtained by reacting 0.3 M sodium bicarbonate-13C (NaH13CO3 98 at. % 13C) with 1 M hydrochloric acid (HCl) inside the chambers that were outfitted with fans, sealed on the ground, and closed overnight on top of 0.8 × 0.8 m microplots in the ryegrass field. After 8 weeks, ryegrass was cut with a sickle and had a resulting δ13C of +51±5.4 ‰ (n=6), C content of 439.3±5.4 g kg−1, and C : N of 10±0.5. Harvested and dried 13C-labelled ryegrass from young and more senescent plant parts differed by only 3.8 ‰, demonstrating that the material was uniformly 13C labelled.

Table 1Physicochemical characteristics and current and past crops of the two selected topsoils used in the soil incubation experiment. Averages of three replicates with standard errors are shown for pH, and measurements of two replicates are shown for Alox, Feox, P, Ca, K, and Mg.

a pH(H2O) was obtained by inserting a glass pH electrode into 1 : 6.25 soil–H2O mixture. b NH4–oxalate extraction and detection using inductively coupled plasma optical emission spectroscopy (ICP-OES). c NH4–acetate–EDTA extraction and ICP-OES analysis.

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2.2 Soil incubation and experimental design

The soils collected from the field were kept moistened and sieved through a 10 mm mesh to keep the initial soil aggregation as intact as possible. Moist soil directly limited the disruption of the original soil macro-aggregation during sieving. The collected air-dried ryegrass biomass (no further refinement after harvesting) was mixed into 7.96 kg of moist sandy loam soil and 7.78 kg of moist silt loam soil at application doses of 0.5, 1.5, and 5 g dry matter kg−1 soil and transferred into large PVC pots (Ø 19.1 cm and height 25 cm). These applications were used as representatives for the rather low, intermediate, and high EOM doses commonly applied in agricultural practices under field conditions, and they correspond to 1.75, 5.25, and 17.5 Mg ha−1 assuming a depth of 25 cm and a bulk density of 1.4 g cm−3. Furthermore, the intermediate dose of 1.5 g dry matter kg−1 soil closely represents the typical application rate of 2.6 Mg C ha−1 yr−1 in German croplands (Riggers et al., 2021). The experiment was limited to only three doses because the large dimensions of the soil mesocosms (6.5–7 kg dry soil per pot) already required considerable amounts of 13C-labelled plant material. Unamended controls were also included for both soil textures. Based on pre-tests, soil bulk densities of 1.35 and 1.25 g cm−3 were employed for the sandy loam and silt loam soils, respectively, as the soil structural integrity was sufficiently intact at these densities, while minimal soil compaction was required for core filling. The sandy loam and silt loam soils were amended with 34 and 20 mg NO3-–N kg−1, respectively, by mixing a KNO3 solution to adjust the soil N concentration to 35.7 mg NO3-–N kg−1 (equivalent to 150 kg N ha−1 as per surface area assuming a depth of 30 cm and a bulk density of 1.4 g cm−3). By adding mineral N, we aimed to exclude the possibility of dosage effects by differences in soil mineral N availability. Soil moisture was maintained at 55 % water-filled pore space by adding demineralized water to the top of the soil cores. The packed soil mesocosms were covered with perforated parafilm to enable gas exchange but limit evaporation and were stored in a dark room at a constant temperature of 20±1.0 °C. Soil moisture was kept constant throughout the incubation experiment by regularly weighing the soil pots and replenishing evaporation water loss with demineralized water. The experiment comprised two soil textures × (three EOM application doses + unamended controls) × three replicates, yielding 24 soil mesocosms.

2.3 Soil CO2 efflux measurements, isotopic analysis, and source partitioning of soil C mineralization

Soil CO2 efflux rates were obtained 14 times during the 90 d experiment by measuring the CO2 build-up over time in an opaque closed PVC chamber headspace (8.45 L) on top of each of the PVC tubes with the soil mesocosms. The closed chamber was outfitted with a battery-powered fan and a pressure vent. Changes in headspace CO2 concentrations and their δ13C (in ‰ relative to the international Vienna Pee Dee Belemnite standard) resulting from soil CO2 emissions were measured in real time by consecutively connecting a cavity ring-down spectroscopy analyser (G2201-i CRDS isotopic CO2/CH4 analyser, Picarro, United States) to each headspace chamber. A linear increase in CO2 was recorded every 1–2 s for  10 min or less to avoid excessive build-up of headspace CO2, which could cause a drop in the diffusion gradient within the soil in treatment–time combinations during high microbial respiration. A linear model was fitted to the observed increase in headspace CO2 concentration, and the soil CO2 efflux rate was obtained from its slope and converted into a mass-based unit (mg kg−1 d−1) using the ideal gas law. δ13C of the emitted CO2 was determined as the intercept of the linear regression line between the headspace air δ13C and reciprocal of the headspace CO2 concentration (Keeling, 1958).

The efflux of CO2 derived from ryegrass mineralization was calculated using the following isotopic mixing model (Mendoza et al., 2022a):

(1) CO 2 –C ( ryegrass ) = CO 2 –C δ 13 C –CO 2 - δ 13 C –CO 2 ( 0 ) δ 13 C –CO 2 ( ryegrass ) - δ 13 C –CO 2 ( 0 ) ,

where CO2–C is the overall soil CO2–C efflux rate, δ13C–CO2 is the isotopic signature of the respired CO2 estimated using the Keeling plot, δ13C–CO2(ryegrass) is the estimated isotopic signature of emitted CO2 resulting from ryegrass mineralization (Eq. 2), and δ13C–CO2(0) is the isotopic signature of CO2 measured from treatments with no ryegrass added (i.e. resulting from SOC mineralization only).

Isotopic fractionation of CO2 caused by either microbial mineralization or diffusive transport to the headspace air was estimated separately for SOC and ryegrass EOM. The isotopic signature of the SOC-derived CO2 measured in the unamended treatments was used to estimate C isotopic fractionation during SOC mineralization and diffusive SOC-derived CO2 transport to the headspace air. The isotopic fractionation of ryegrass C mineralization and its diffusive transport to the headspace air was estimated as the shift in δ13C of the CO2 emitted from the highest EOM dose (i.e. from ryegrass + SOC) and CO2 emissions from the unamended control (i.e. from SOC) following a mass balance analogous to that of Keeling (1958) as follows:

(2) δ 13 C–CO 2 ( ryegrass ) = CO 2 –C 5 δ 13 C–CO 2 ( 5 ) - CO 2 –C ( 0 ) δ 13 C–CO 2 ( 0 ) CO 2 –C 5 - CO 2 –C ( 0 ) ,

where CO2–C(5) and CO2–C(0) are the total CO2–C fluxes corresponding to ryegrass doses of 5 and 0 g kg−1 soil measured for each soil texture, and δ13C–CO2(5) and δ13C–CO2(0) are the respective δ13C–CO2.

The CO2–C derived from SOC mineralization in the amended soils, CO2–C(SOC) (mg CO2–C kg soil d−1), was calculated as follows:

(3) CO 2 –C ( SOC ) = CO 2 –C - CO 2 –C ( ryegrass ) .

Finally, the cumulative amounts of mineralized ryegrass C and SOC were calculated. The relative priming effect (PE) of SOC mineralization induced by the EOM application dose was calculated for each soil texture as follows:

(4) PE ( SOC ) = CO 2 –C ( SOC ) - CO 2 –C ( 0 ) CO 2 –C ( 0 ) 100 .

2.4 Microbial biomass carbon and soil mineral nitrogen

Eight additional soil mesocosms (four EOM doses of 0, 0.5, 1.5, and 5 g kg−1 soil × two soil textures of sandy loam and silt loam) were prepared as described in Sect. 2.2 but employing non-labelled ryegrass grown under the same environmental and edaphic conditions as the 13C-labelled grass. After 45 d, soil was sampled, and microbial biomass carbon (MBC) was quantified using the fumigation–extraction method (Carter and Gregorich, 2007). We measured MBC after 45 d because, then, we observed that most of the SOC priming and EOM mineralization had occurred. Before and after fumigating fresh soil samples with ethanol-free chloroform, 30 g of soil was extracted with 60 mL 0.5 M K2SO4. These extracts were passed through a filter (Whatman 5) and analysed for their dissolved organic carbon (OC) concentration using a total organic carbon (TOC) analyser (TOC/TN analyser, Skalar, the Netherlands). MBC was determined as the difference in extractable C between fumigated and non-fumigated soils and was corrected with a factor of 0.45 to account for the MBC fraction extractable by fumigation (Joergensen, 1996). The EOM-mediated MBC increase (i.e. difference in MBC between amended and control divided by application dose) was also calculated for each application dose to test whether MBC was proportionally stimulated per unit of EOM added.

At the end of the 90 d incubation experiment, soil from each mesocosm was destructively sampled, and mineral N was determined. The soil was taken out of the PVC pots and homogenized, from which 20 g was weighed and shaken with 100 mL 1 M KCl for 1 h, and then the extracts were filtered (Macherey-Nagel, USA, MN 616 1/4, Ø 150 mm filters). NH4+–N and NO3-–N concentrations in the extracts were measured using a continuous-flow analyser (Skalar, San++ Continuous Flow Analyser, the Netherlands). Soil NH4+–N was negligible in all treatments; therefore, only NO3-–N concentrations were considered.

2.5 Soil redox potential

The soil redox potential (EH) was measured 21 times during the 90 d incubation experiment in each of the 24 mesocosms. Every soil core was permanently outfitted with one Ag|AgCl saturated KCl reference electrode and a redox probe (Paleoterra, Netherlands). The redox probes consisted of two platinum sensors (surface area ±5 mm2 each) situated 5 and 15 cm below the soil surface. The reference electrodes and redox probes were first tested and calibrated with 124 and 250 mV redox standards (Sigma-Aldrich, Ireland). Soil EH readings were obtained by connecting the reference and Pt electrodes through a high-impedance redox mV meter (Paleoterra, the Netherlands). The EH readings were expressed versus the standard hydrogen electrode after temperature and offset corrections with the Ag|AgCl reference electrode by adding 204 mV to the mV readings.

2.6 Pore neck size distribution

After 45 d, four intact soil cores were carefully sampled using stainless-steel sampling rings (Ø 5.0 cm and height 5.1 cm) from each of the eight mesocosms described in Sect. 2.4. These rings were used to determine the soil water retention curve using the sandbox pressure plate method. After fitting a nylon mesh onto the bottom of the rings, they were placed on a sand box apparatus (Eijkelkamp Agrisearch Equipment, Giesbeek, Netherlands); saturated; subjected to pressure potentials of −10, −30, −50, −70, and −100 hPa; and weighed for the corresponding soil water content after reaching equilibrium. The soil water contents at soil matric potentials of −330, −1000, and −15 000 hPa were determined using pressure plates (Eijkelkamp Agrisearch Equipment, Giesbeek, Netherlands, and Soil Moisture Equipment Corp., Santa Barbara, CA, USA). The volume of the soil pore neck size classes corresponding to these water potentials was calculated using Jurin's law: d=-3000/Ψ, where d is the pore neck diameter (µm), and Ψ the matric potential (hPa) (Schjønning et al., 1999). Consequently, the volume proportions (vol %) of pores with pore neck diameters of >300, 100–300, 60–100, 43–60, 30–43, 9–30, 3–9, 0.2–3, and <0.2µm were calculated.

2.7 Statistical analyses

General linear models (GLMs) were used to evaluate EOM dose–response relationships at a single time point, whereas linear mixed models (LMMs) were used to assess EOM dose effects over time. Specifically, GLMs were employed to assess the effects of EOM dose and soil texture on EOM mineralization, SOC mineralization, and mineral N at the end of the incubation and on MBC and the EOM-mediated MBC increase as a function of dose at day 45 of the incubation. If the GLM showed a significant interaction between EOM dose and soil texture, separate GLMs with different EOM doses were conducted per soil texture. In the case of no interaction, the interaction term was removed from the model, and an additive model was built with EOM dose and soil texture. Additionally, one-way analysis of variance (ANOVA) was conducted for each soil texture to check the effects of EOM dose on the volume percentage of pore neck size classes. On the other hand, LMMs were used to compare the effects of EOM dose on soil EH over time with the fixed effects of EOM dose, measurement depth, and interaction depth × dose and the random effects of time and replicate. Normality was assessed by means of QQ plots of the residuals, and homoscedasticity was verified by plotting residuals versus fitted values. The Shapiro–Wilk test and Levene test were used to confirm the normality of the distributed model residuals and equality of variances, respectively. When those assumptions were not met, log transformations were applied to our data. Pearson's correlation coefficients were calculated for the relative SOC priming and MBC. All statistical tests were conducted with R version 3.6.1, using the packages car and agricolae for GLM and one-way ANOVA, lme4 for LMM, and hmisc and ggpubr to detect correlations between the variables.

3 Results

3.1 EOM mineralization

The amount of mineralized EOM increased linearly after 90 d with the EOM application dose for both textures (P<0.001), with determination coefficients close to 1. Less EOM was mineralized in the sandy loam than in the silt loam soil, with values of 221 and 291 mg C g−1 EOM added, respectively (Fig. 2 top). The relative fraction of added EOM mineralized after 90 d was independent of soil texture. However, in the silt loam soil, the relative fraction of mineralized EOM tended to decrease with increasing EOM dose (Fig. 2 bottom). Given the limited number of EOM doses included and a close linear response of the cumulative EOM mineralization to EOM dose (with an intercept of zero due to the absence of cumulative EOM mineralization when no EOM is added), this trend should be interpreted with caution.

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f02

Figure 2Cumulative mineralized EOM–C (ryegrass) after 90 d since incorporation into sandy loam (SL) or silt loam (SiL) soil as a function of its application dose (upper figure). The lower figure presents the proportion of mineralized ryegrass C as a function of EOM dose. The *** denotes significance levels < 0.001 of the linear model interaction effect between soil texture and EOM dose and for the linear response of EOM mineralization to EOM dose. Since no EOM mineralization was expected in the absence of added EOM, a linear model through the origin was fitted for the cumulative EOM mineralization. Polygons around regression lines represent 95 % confidence intervals.

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3.2 SOC mineralization

After 90 d of incubation, the cumulative mineralized SOC increased linearly with an increasing application dose in both soils, and this dosage response was stronger in the silt loam soil (117.2 mg C g−1 EOM) (P<0.001) compared with the sandy loam soil (49.6 mg C g−1 EOM) (Fig. 3, top).

EOM application dose also stimulated the relative priming of native SOC mineralization (i.e. difference in SOC mineralization between amended and unamended control relative to the unamended control). Such positive relative SOC priming increased by 12.6 % g−1 EOM added in both the sandy loam and silt loam soil textures (P<0.001; Fig. 3, bottom).

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f03

Figure 3Cumulative mineralized native SOC (mg C kg−1) after 90 d for a sandy loam (SL) and a silt loam (SiL) soil as a function of EOM (ryegrass) application dose (upper figure). The lower graph compares the relative priming of native SOC mineralization in both soil textures. The * denotes significance levels of the linear model interaction effect between soil texture and EOM dose, and the linear response of the cumulative and primed SOC mineralization to EOM dose is denoted with ***< 0.001, ** <0.01, and * < 0.05; n.s. represents not significant. Polygons around regression lines represent 95 % confidence intervals.

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3.3 Soil microbial biomass

MBC was linearly related to EOM dose after 45 d of incubation (P<0.001; Fig. 4 top). The increase in MBC in response to an increasing EOM dose was double in the silt loam compared to in the sandy loam soil, i.e. +25.3 and +12.3 mg MBC g−1 EOM added, respectively. The resulting overall increase in MBC was not proportional to EOM dose; therefore, an EOM-mediated MBC increase (i.e. the extra MBC in the EOM-amended vs. control soil) tended to decrease with EOM dose, although not significantly (P=0.428; R2=0.15; Fig. 4, bottom).

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f04

Figure 4Microbial biomass carbon (MBC) after 45 d of incubation of the sandy loam (SL) and silt loam (SiL) soils amended with EOM (ryegrass) at various application doses (upper figure). The corresponding EOM-mediated MBC increase is presented in the lower figure. The * denotes significance level effects of the linear model interaction between soil texture and EOM dose and the effect of EOM dose on MBC and EOM-mediated MBC increases, with *** <0.001, ** <0.01, and * <0.05; n.s. represents not significant. Polygons around regression lines represent 95 % confidence intervals.

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3.4 Soil redox potential

Soil EH varied from approximately +550 to +850 mV in the sandy loam soil cores (Fig. 5). It tended to decrease with increasing EOM dose until 5 d from the start of the incubation, after which it became indifferent to any EOM addition, although, in the control treatment, it mostly remained above EH in the EOM-amended soils. Nevertheless, no significant differences were observed in EH between the EOM treatments in the sandy loam soil. In the silt loam soil, the overall EH was lower than that in the sandy loam soil and varied from approximately +470 to +700 mV. Although EH in the silt loam soil was consistently lower for the 5 g kg−1 soil EOM treatment during the first 41 d, the dose effect was not statistically significant despite six replicate measurements per treatment. Overall, for both soils, the observed EH ranges indicated prevailing oxic conditions (>300 mV), with O2 being the main electron acceptor used in microbial respiration (Reddy and DeLaune, 2008). The non-significant interaction between dose × depth (5 and 15 cm below surface) for both soil textures demonstrated that the dosage effect on soil EH did not differ among soil depths.

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f05

Figure 5Evolution of the soil redox potential measured at 5 and 15 cm depth across the 90 d incubation experiment for the sandy loam and silt loam soils amended with different doses of EOM (ryegrass). Error bars show standard errors of means (n=6).

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3.5 Soil pore structure

In sandy loam soil, no effect of EOM addition was observed on the pore neck size distribution (Fig. 6). However, in the case of the 5 g kg−1 soil EOM dose, a reduction in the 3–9 µm class volume percentage of 20 % compared with the unamended control (P<0.05) was observed. In silt loam soil, EOM application more strongly affected the pore neck size distribution, especially at higher EOM doses. Adding EOM at 1.5 and 5 g kg−1 soil increased the volume percentage of the >300µm pore class by 48 % and 49 %, respectively, compared with the control (although only at P<0.1). The addition of 5 g EOM kg−1 also increased the volume fraction of the 60–100 µm class by 21 % compared with the control (P<0.05). The 43–60 µm class volume fraction was also larger in the 5 g kg−1 soil EOM treatment than in the 0.5 g kg−1 soil treatment (P<0.05). EOM doses of 0.5, 1.5, and 5 g kg−1 soil increased the volume fraction of the 3–9 µm class by 50 %, 62 %, and 32 %, respectively (P<0.05). In contrast, there was a decrease in the volume fraction of the 0.2–3 µm pore size class of 12 %, 20 %, and 17 % with EOM doses of 0.5, 1.5, and 5 g kg−1, respectively (P<0.01).

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f06

Figure 6Volume fraction (unitless) of nine pore neck size classes (i.e. pores with given intervals of the pore neck diameter) in the sandy loam and silt loam soils after the application of EOM (ryegrass) doses and an unamended control (n=4). The * represents significant differences (one-way ANOVA) in the volume fraction of the pore neck class between EOM doses within each soil texture, with *** <0.001, ** <0.01, * <0.05, and  <0.1.

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3.6 Soil mineral nitrogen

Soil mineral N measured after 90 d of incubation increased linearly with EOM dose in both sandy loam and silt loam soils (P<0.001; Fig. 6). It was always higher in the EOM-amended treatments than in the unamended controls. In the sandy loam soil, soil mineral N increased more strongly with EOM dose than in the silt loam soil, with values of +13.1 vs. +6.9 mg N g−1 EOM added, respectively.

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Figure 7Soil mineral nitrogen (NO3-–N) content at the end of the 90 d incubation as a function of EOM dose for a sandy loam (SL) and a silt loam (SiL) soil. The * denotes the significance levels of the linear model variable soil textures and EOM doses and their interaction with soil mineral N, with *** <0.001. Polygons around regression lines represent 95 % confidence intervals.

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4 Discussion

4.1 Mineralization of EOM as a function of its application dose

In the sandy loam soil and silt loam soils, EOM-derived C mineralization was, overall, independent of its application dose. A decreasing tendency did emerge with increasing EOM dose in the silt loam soil (Fig. 2) but did not provide sufficient evidence to support our hypothesis that the relative EOM mineralization would increase with increasing EOM dose. Overall, around 50 % and 75 % EOM–C was mineralized in the sandy loam and silt loam soils after the 90 d incubation experiment (Fig. 2). The unresponsiveness of relative EOM mineralization to EOM application dose in the sandy loam soil and silt loam soils was consistent with the results of Shahbaz et al. (2017a), who observed equal relative degradation of wheat crop residue with EOM doses of 1.40 and 5.04 g kg−1. We previously also found the response of maize straw C mineralization to be unresponsive to its application dose in soils with contrasting native soil organic matter (SOM) levels (Mendoza et al., 2022a) and likewise for ryegrass (Mendoza et al., 2022b). These results are, however, in contrast to a study by Don et al. (2013), who reported that the mineralization of total soil C (SOC and EOM) was much slower when compost was diluted in a soil column than when it was concentrated. They postulated that closer proximity between the substrate and decomposers would allow more efficient decomposition. In our experiment, the EOM-mediated MBC increase was not proportional to EOM dose in both soil textures (Fig. 4, bottom), suggesting that further growth of MBC was energetically equal for the different included substrate concentrations. This does not support the view of Don et al. (2013) or that of Ekschmitt et al. (2005), who postulated, based on the modelling output of an inverse Michaelis–Menten equation, that, as the enzyme pool increases, the activity per unit enzyme decreases, with a lower relative C decomposition at higher C concentrations. They concluded that energy costs are not returned by decomposition products over a certain enzyme production rate, creating a negative feedback loop for microbial activity.

Our hypothesis that the relative EOM mineralization response to dose would flatten for higher EOM doses in the silt loam soil was refuted. We expected that the increase in MBC and microbial respiration caused by high EOM doses could result in excessive O2 demand that, when not met by O2 diffusion, could limit EOM degradation. Such O2 limitations due to higher EOM doses may be expected to be more severe in finer-textured soil due to lower air permeability. Soil EH was, indeed, generally lower in the silt loam soil than in the sandy loam soil, and an increasing EOM dose more strongly decreased the soil EH in silt loam soil, but, still, EH remained at levels indicative of aerobic conditions (Fiedler et al., 2007; Husson, 2013). Furthermore, as NO3- concentrations increased with an increasing EOM dose, there was no indication of enhanced denitrification with an increasing EOM dose. The overall oxidized soil state, even in the finer-textured soil with a high dose of EOM, might be linked to the development of the soil pore network; specifically, high EOM doses significantly increased the volume percentage of larger pore neck classes (i.e. 43–60, 60–100, and >300µm) in the silt loam soil. Hence, from the EH readings, we observed no indication that O2 limitations would have restricted the relative EOM mineralization in the silt loam soil at higher EOM doses as we initially hypothesized.

Drawing conclusions for EOM management in the field based on this 90 d lab incubation experiment at 20 °C is to be done with care. Nevertheless, the ordination of relative EOM mineralization patterns remained consistent among the established dose treatments over time and is projected to remain so for at least some time (Fig. S1 in the Supplement). For instance, mineralization over 137 d at the established 20 °C in the lab experiment equates to about 1 year in the field in Belgium (9.7 °C on average) (De Neve et al., 1996). Thus, our results suggest no or, at most, a limited negative effect of adding EOM at increasing doses of its annual mineralization, a traditionally used metric in C balance calculations (the so-termed humification coefficient). However, empirical evidence from field experiments is now needed to confirm these findings.

4.2 Effect of EOM application dose on native SOC mineralization

We hypothesized that SOC mineralization would be stimulated by an increasing EOM dose, with stronger effects in sandy loam soil as SOC may be less stabilized than in silt loam soil. Priming of SOC mineralization was linearly related to the ryegrass application dose (P<0.001), with native SOC mineralization stimulated by 50 and 125 mg C g−1 EOM added in the sandy loam and silt loam soils, respectively (P<0.001). Shahbaz et al. (2017a) reported that additions of ground wheat residue of 1.40 and 5.04 g kg−1 soil to a silt loam soil increased SOC mineralization by 50 % and 90 %, respectively. In our study, SOC mineralization increased by 8 %, 10 %, and 54 % in the sandy loam soil and by 4 %, 9 %, and 65 % in the silt loam soil from the low to high EOM doses. In agreement with our study, a positive linear relationship between glucose dose (0.008 to 1.606 g C kg−1 per week) and SOC priming was reported by Liu et al. (2017). In contrast, Xiao et al. (2015) reported a decrease in the priming of SOC per unit of litter (mix of <2 mm aboveground plants of a steppe vegetation) added (0, 60, 120, 240, and 480 g C m−2). Moreover, Guenet et al. (2010) reported that the addition of wheat straw (3.5, 5.2, and 7.5 g kg−1 soil) did not proportionally stimulate SOC mineralization. These outcomes are in contrast with the observed proportional priming of SOC with increasing EOM in this study. Nitrogen was added to all soils, and high soil N concentrations (>50 mg NO3-–N kg−1) were observed at the end of the experiment in all treatments. Thus, nitrogen availability likely did not limit heterotrophic activity in our study, but it possibly did restrict C mineralization at increasing EOM doses in the experiments of Guenet et al. (2010) and Xiao et al. (2015). A commonly proposed mechanism to explain SOC priming is the “N-mining theory” (Craine et al., 2007), which assumes that microbes decompose native SOC in search of mineral N to meet their metabolic demands. As explained above, with extra mineral N added initially to our soils and a clear further net soil N mineralization, this mechanism can largely be ruled out. Alternatively, SOC priming is often explained by the “co-metabolism hypothesis” (Bingeman et al., 1953; Kuzyakov and Domanski, 2000); i.e. the application of a labile substrate, such as the ryegrass used here, stimulates microbial biomass growth and enzyme production, which, in addition to decomposing EOM, also triggers native SOC mineralization. MBC was linearly related to EOM dose in both soils (Fig. 4) and was positively correlated with the rate of relative SOC priming in both sandy loam and silt loam soils (r=0.63 and 0.72, respectively; P<0.05). While these trends support the idea that increased microbial biomass and activity with EOM addition primed SOC mineralization, further proof is required to identify co-metabolism as the principal mode of SOC priming. Most studies (e.g. Xiao et al., 2015) have shown that the priming of SOM mineralization relates linearly to MBC but, indeed, likewise, could not unequivocally pinpoint the mechanisms involved. An overall stronger priming of SOC per gram of soil in the silt loam soil, regardless of EOM dose, likely results from an inherent better SOC degradability compared to the sandy loam soil, as evidenced by the much higher MBC and SOC mineralization in the unamended control soils (Figs. 3 and 4). This contrast in MBC and heterotrophic activity is unlikely to have been the result of differences in SOC content, the content of pedogenic oxides, or pH as these properties were very similar between both textured soils. Instead, this is more likely to result from a combination of differences in SOC quality and soil physical structure between both textures, but such effects are difficult to discriminate from one another.

The duration of the present 90 d incubation experiment was sufficiently long to capture trends in SOC priming. The temporal course of the SOC priming response to EOM dose was also similar in both textured soils. In sandy loam soil, an increasing EOM dose induced higher positive SOC priming between days 2 and 12 of the incubation (1.5 g kg−1 soil vs. control, P=0.03; 5 g kg−1 soil vs. control, P<0.001), whereas priming was not significant from day 12 onwards. In silt loam soil, SOC priming occurred between days 2 and 17 of the incubation (5 g kg−1 soil vs. control, P=0.001) but no longer thereafter (Fig. S2). As SOC priming was, thus, rather short-lived, this allows careful projections with regard to the relevance of EOM dose responses to priming in the overall SOC balance, which considers EOM and SOC mineralized as compared to added and initially present organic C, respectively. This balance proved to be negative or close to zero for the silt loam soil and the low EOM dose in the sandy loam soil (Table S1 in the Supplement). In other words, C mineralization exceeded the added C dose with an eventual net loss of C relative to that initially present as SOC and added via EOM. This result is remarkable at first sight but is explained by the very high observed SOC mineralization of 3 %–9 % of SOC, a situation that is typical for lab incubation studies but that is not met in the field; in the area where soil was collected, this would amount to 2 %–3 % of SOC being mineralized across the course of an entire year (Vleeshouwers and Verhagen, 2002). Hence, we may only compare relatively the net C balance of the used EOM dose scenarios in this study. Adding a low EOM dose had the least favourable effect on the C balance, at least in the sandy loam soil (P<0.01), while no significant effect of EOM dose on the C balance was observed in the silt loam soil. Priming contributed from around 4 % up to 40 % to this overall large SOC mineralization, going from low to high application doses in both soils (Table S1), and was thus certainly a non-negligible term in the net C balance. Finally, it is important to note that the formation of new SOC from decomposing EOM was not considered here, although this would yield a more accurate prediction of the net effect of EOM doses on the SOC balance than when using C mineralization data. Our experimental set-up did not allow the detection of remnant EOM and newly formed SOC against the native SOC background. Although not confirmed statistically, it is noteworthy that, especially for silt loam soil, less MBC was produced per unit of EOM added. Microbial biomass-derived necromass contributes to SOC formation (Kästner et al., 2021) and, according to Liang et al. (2019), can make up up to 56 % of the total SOC in temperate agricultural soils. Thus, a relative decrease in the formed MBC per unit of EOM added might adversely impact SOC preservation when EOM is added through fewer but larger doses. Ultimately, long-term field observations are again required to confirm the impact of EOM dosage on SOC storage.

https://soil.copernicus.org/articles/11/105/2025/soil-11-105-2025-f08

Figure 8Overview of the mechanisms shaping the relative EOC mineralization (% min. EOC) and relative SOC priming in response to EOM application dose. In the sandy loam soil (left-hand side), an increasing EOM dose supplied energy for microbial growth and extracellular enzyme production, which possibly degraded native SOC (i.e. co-metabolism) but did not affect the mineralized EOM fraction. Soil EH decreased slightly with an increasing EOM dose, but C mineralization remained aerobic, as expected in the sandy loam soil. Here, soil structure was not affected much by EOM dose. In the silt loam soil (right-hand side), where O2 diffusion is expected to be inherently constrained, an increasing EOM dose induced macroporosity, which also compensated for the large O2 consumption due to larger microbial growth. Here, it is mainly co-metabolism that could explain the positive priming with an increasing EOM dose in the silt loam soil, although it did not affect the percentage of decomposed EOM.

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4.3 Effect of soil pore structure on priming of SOC mineralization

We also investigated whether EOM application dose affected soil structure and if this, in turn, explained the priming of SOC mineralization. We did not observe major changes in the soil structure with respect to different EOM doses in the sandy loam soil. However, EOM stimulated the volume percentage of several larger pore classes (43–60, 60–100, and >300µm; P<0.05, 0.05, and 0.1, respectively) in the silt loam soil. We furthermore found positive linear relationships (via linear regressions) between the silt loam soil volume fraction of pore neck size classes 60–100 and >300µm and relative SOC priming (R2=0.34 and 0.36 and P=0.09 and 0.08, respectively) and a negative relation with the 3–9 µm class that also depended on EOM dose. We therefore hypothesize that the development of macroporosity might have contributed to the promotion of relative SOC priming in the silt loam soil. In contrast, no such relationships existed for the sandy loam soil, and the observed increase in relative SOC priming with EOM dose must have been mediated by other mechanisms. The contrasting unresponsiveness of EOM mineralization to EOM dose as compared to SOC priming could be explained as follows. In particular, the majority of SOC is usually mineral-associated in agricultural soils (Kögel-Knabner et al., 2008) and is therefore situated within small pores where oxygen provision can be readily constrained (Kuka et al., 2007), while the added discrete substrate particles necessarily reside in large macropores, due to which SOC and not EOM mineralization may become O2 limited sooner. Therefore, mineralization of SOC would logically be more dependent on the moderation of soil structure towards more macropores caused by EOM amendment. Experimental verification of this hypothesis will be challenging as spatial mapping of O2 availability in soil pore space is practically difficult. As a first step, modelling of soil O2 transport in 3D soil models based on soil pore models derived from CT volumes could provide further insights into the link between SOC mineralization and pore structure (Schlüter et al., 2022), but such an approach then needs to be validated, e.g. through integration of O2 microsensors with pore metrics derived from X-ray µCT, as recently demonstrated by Rohe et al. (2021). We further compared the results with our previous study using the same soils (although sampled at different times in the field) and exactly the same source of EOM (although more refined) as used here. In the previous study, ryegrass doses of 0.5 and 5 g kg−1 soil stimulated macroporosity formation and SOC mineralization by 30 % and 71 % in sandy loam soil but only by 28 % in silt loam soil at high doses when the soil structure was apparently unaffected (Mendoza et al., 2022b). Due to differences in initial soil disturbance, in the current experiment, the silt loam soil had a much larger fraction of very small pores (>10 % of the soil volume consisted of <0.2µm pores) when compared to that in Mendoza et al. (2022b). Thus, improved soil aeration, which likely resulted from the increase in the volume percentage of >300, 60–100, and 43–60 µm pore classes with EOM added, could, again, explain the stronger observed stimulation of SOC mineralization in this study when compared to that of Mendoza et al. (2022b). Interestingly, the soil EH data did not indicate improved aeration in the silt loam soil at higher EOM application doses, but this was not necessarily expected because the two phenomena that co-determine EH probably could have counterbalanced each other as follows: improved aeration and a corresponding increase in soil EH with more EOM added vs. more heterotrophic activity (and corresponding electron donation) at the same time. A more systematic approach combining microscale soil EH measurements, soil pore network structure, and soil respiration would enable confirmation of this potentially interesting link between EH and porosity and their resulting effect on SOC dynamics. An overview of the main mechanisms by which EOM application dose affects the relative EOM and native SOC mineralization is presented in Fig. 8.

5 Conclusion

Limited research exists on the effect of EOM dose on C mineralization in soil, which has also been largely overlooked by SOC models. Overall, our results showed no response of relative EOM mineralization to EOM dose in heavy- or light-textured soil, in line with a null response of MBC formation to EOM dose. A large range of doses and soil textures including clay and sandy soils would help clarify if such a dosage independency is consistently observed. Our experiment revealed a lower bulk soil EH in the silt loam soil than in the sandy loam, as expected. However, since EH remained within the aerobic range, even at a high EOM dose, this suggests that O2 supply was sufficient to sustain the proportionally higher absolute EOM mineralization. We hypothesize that the enhanced macroporosity at the established higher EOM doses may have improved soil aeration, preventing the onset of O2 limitations. Revealing causality and identifying conditions where increased O2 demand due to enhanced microbial activity at a higher EOM dose outweighs the potentially improved gaseous transport from increased macroporosity will require experiments focused on soil structure changes and microscale EH measurements. Tentative C balance calculations finally indicated that adding EOM at a low dose (around 0.5 g kg−1) had the least favourable effect on SOC, at least in the sandy loam soil, and no effect in the silt loam soil. However, these tentative C balances of this upscale pot experiment should now be confirmed in the field, where environmental conditions vary.

Data availability

The data generated in this study are available from the corresponding author upon reasonable request.

Supplement

The supplement related to this article is available online at: https://doi.org/10.5194/soil-11-105-2025-supplement.

Author contributions

OM, SDN, and SS conceptualized the study and acquired funding. OM, HD, HL, and AF performed the experiment. OM wrote the original draft, and all the authors edited and reviewed the paper.

Competing interests

At least one of the (co-)authors is a member of the editorial board of SOIL. The peer-review process was guided by an independent editor, and the authors also have no other competing interests to declare.

Disclaimer

Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors.

Acknowledgements

We thank Mathieu Schatteman, Tina Coddens, Anne-Mie Terryn, Sophie Schepens, Maarten Volckaert, and Thu Tran for their assistance during the chemical and physical analyses and for setting up the experiments.

Financial support

This research has been supported by the Fonds Wetenschappelijk Onderzoek (grant no. FWO: G066020N). Funding to Orly Mendoza was provided by a Secretariat for Higher Education, Science, Technology and Innovation grant (SENESCYT; IFTH grant no. 44175).

Review statement

This paper was edited by Alix Vidal and reviewed by Julia Schroeder and one anonymous referee.

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Farmers frequently apply fresh organic matter such as crop residues to soil to boost its carbon content. Yet, one burning question remains: does the quantity of applied organic matter affect its decomposition and that of native soil organic matter? Our experiment suggests that smaller application doses might deplete soil organic matter more rapidly, at least in coarser-textured soil. In contrast, applying intermediate or high doses might be a promising strategy for maintaining it.